Protein–RNA interactions for Protein: Q9BSH5

HDHD3, Haloacid dehalogenase-like hydrolase domain-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 251 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD3Q9BSH5 NACC1-201ENST00000292431 4445 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
HDHD3Q9BSH5 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC13.32□□□□□ -0.28
HDHD3Q9BSH5 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
HDHD3Q9BSH5 LRRN1-201ENST00000319331 3823 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
HDHD3Q9BSH5 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
HDHD3Q9BSH5 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
HDHD3Q9BSH5 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
HDHD3Q9BSH5 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC13.32□□□□□ -0.28
HDHD3Q9BSH5 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC13.32□□□□□ -0.28
HDHD3Q9BSH5 AL355306.1-201ENST00000415580 579 ntBASIC13.32□□□□□ -0.28
HDHD3Q9BSH5 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC13.32□□□□□ -0.28
HDHD3Q9BSH5 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
HDHD3Q9BSH5 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC13.32□□□□□ -0.28
HDHD3Q9BSH5 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC13.32□□□□□ -0.28
HDHD3Q9BSH5 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC13.32□□□□□ -0.28
HDHD3Q9BSH5 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC13.32□□□□□ -0.28
HDHD3Q9BSH5 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC13.32□□□□□ -0.28
HDHD3Q9BSH5 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
HDHD3Q9BSH5 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC13.32□□□□□ -0.28
HDHD3Q9BSH5 AL450472.2-201ENST00000603663 1156 ntBASIC13.32□□□□□ -0.28
HDHD3Q9BSH5 LINC00552-201ENST00000625151 2579 ntBASIC13.32□□□□□ -0.28
HDHD3Q9BSH5 SEPT9-208ENST00000541152 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
HDHD3Q9BSH5 TRIM67-202ENST00000444294 9320 ntAPPRIS ALT1 TSL 5 BASIC13.32□□□□□ -0.28
HDHD3Q9BSH5 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC13.32□□□□□ -0.28
HDHD3Q9BSH5 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
HDHD3Q9BSH5 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC13.32□□□□□ -0.28
HDHD3Q9BSH5 GPI-205ENST00000586425 1799 ntTSL 5 BASIC13.32□□□□□ -0.28
HDHD3Q9BSH5 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC13.32□□□□□ -0.28
HDHD3Q9BSH5 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
HDHD3Q9BSH5 CYP4F24P-201ENST00000586049 1580 ntBASIC13.32□□□□□ -0.28
HDHD3Q9BSH5 ZNF451-201ENST00000357489 4998 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
HDHD3Q9BSH5 DNAJC5-201ENST00000360864 5213 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
HDHD3Q9BSH5 STRN-202ENST00000379213 2254 ntTSL 5 BASIC13.32□□□□□ -0.28
HDHD3Q9BSH5 FABP1-202ENST00000393750 1839 ntTSL 2 BASIC13.32□□□□□ -0.28
HDHD3Q9BSH5 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC13.32□□□□□ -0.28
HDHD3Q9BSH5 TEAD3-201ENST00000338863 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
HDHD3Q9BSH5 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
HDHD3Q9BSH5 WDR97-201ENST00000323662 6916 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
HDHD3Q9BSH5 ZNF18-201ENST00000322748 2767 ntAPPRIS P3 TSL 2 BASIC13.32□□□□□ -0.28
HDHD3Q9BSH5 GRK6-203ENST00000393576 2792 ntTSL 5 BASIC13.32□□□□□ -0.28
HDHD3Q9BSH5 ZNF324-201ENST00000196482 3000 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
HDHD3Q9BSH5 SLC34A1-201ENST00000324417 2573 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
HDHD3Q9BSH5 EXOC6B-209ENST00000634650 2583 ntTSL 5 BASIC13.31□□□□□ -0.28
HDHD3Q9BSH5 FAM198B-203ENST00000585682 4900 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
HDHD3Q9BSH5 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC13.31□□□□□ -0.28
HDHD3Q9BSH5 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC13.31□□□□□ -0.28
HDHD3Q9BSH5 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC13.31□□□□□ -0.28
HDHD3Q9BSH5 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC13.31□□□□□ -0.28
HDHD3Q9BSH5 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
HDHD3Q9BSH5 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
HDHD3Q9BSH5 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC13.31□□□□□ -0.28
HDHD3Q9BSH5 USP28-214ENST00000545540 3431 ntTSL 2 BASIC13.31□□□□□ -0.28
HDHD3Q9BSH5 TIMP2-201ENST00000262768 3652 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
HDHD3Q9BSH5 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
HDHD3Q9BSH5 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC13.31□□□□□ -0.28
HDHD3Q9BSH5 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
HDHD3Q9BSH5 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
HDHD3Q9BSH5 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC13.31□□□□□ -0.28
HDHD3Q9BSH5 AL669918.1-201ENST00000452392 2705 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
HDHD3Q9BSH5 PODN-202ENST00000371500 3287 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
HDHD3Q9BSH5 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
HDHD3Q9BSH5 B4GALNT3-201ENST00000266383 5068 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
HDHD3Q9BSH5 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
HDHD3Q9BSH5 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
HDHD3Q9BSH5 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
HDHD3Q9BSH5 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
HDHD3Q9BSH5 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
HDHD3Q9BSH5 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC13.31□□□□□ -0.28
HDHD3Q9BSH5 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
HDHD3Q9BSH5 TFAMP1-201ENST00000412727 736 ntBASIC13.31□□□□□ -0.28
HDHD3Q9BSH5 AL671277.1-201ENST00000429656 993 ntBASIC13.31□□□□□ -0.28
HDHD3Q9BSH5 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
HDHD3Q9BSH5 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC13.31□□□□□ -0.28
HDHD3Q9BSH5 AC091812.2-201ENST00000619081 385 ntBASIC13.31□□□□□ -0.28
HDHD3Q9BSH5 AC008267.7-201ENST00000624570 1194 ntBASIC13.31□□□□□ -0.28
HDHD3Q9BSH5 ALDH1B1-201ENST00000377698 3066 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
HDHD3Q9BSH5 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
HDHD3Q9BSH5 TARSL2-201ENST00000335968 3610 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
HDHD3Q9BSH5 GTF2IRD1-201ENST00000265755 3430 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
HDHD3Q9BSH5 C3orf62-201ENST00000343010 4235 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
HDHD3Q9BSH5 DCAKD-201ENST00000310604 2122 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
HDHD3Q9BSH5 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC13.31□□□□□ -0.28
HDHD3Q9BSH5 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
HDHD3Q9BSH5 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC13.31□□□□□ -0.28
HDHD3Q9BSH5 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
HDHD3Q9BSH5 TTLL13P-202ENST00000438251 2738 ntAPPRIS P5 TSL 5 BASIC13.31□□□□□ -0.28
HDHD3Q9BSH5 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
HDHD3Q9BSH5 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
HDHD3Q9BSH5 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC13.3□□□□□ -0.28
HDHD3Q9BSH5 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
HDHD3Q9BSH5 KRT8P37-201ENST00000451609 1420 ntBASIC13.3□□□□□ -0.28
HDHD3Q9BSH5 SEMA5B-206ENST00000451055 4579 ntAPPRIS ALT2 TSL 2 BASIC13.3□□□□□ -0.28
HDHD3Q9BSH5 MYO15B-237ENST00000642007 4893 ntBASIC13.3□□□□□ -0.28
HDHD3Q9BSH5 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
HDHD3Q9BSH5 VWA7-201ENST00000375688 2881 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
HDHD3Q9BSH5 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC13.3□□□□□ -0.28
HDHD3Q9BSH5 SOCS5-202ENST00000394861 4058 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
HDHD3Q9BSH5 FAM219A-204ENST00000379081 3543 ntTSL 5 BASIC13.3□□□□□ -0.28
HDHD3Q9BSH5 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
HDHD3Q9BSH5 EIF4G1-216ENST00000427845 5038 ntTSL 5 BASIC13.3□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms