Protein–RNA interactions for Protein: Q99732

LITAF, Lipopolysaccharide-induced tumor necrosis factor-alpha factor, humanhuman

Predictions only

Length 161 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LITAFQ99732 AL137013.1-201ENST00000432946 1228 ntBASIC10.47□□□□□ -0.73
LITAFQ99732 DRAXINP1-201ENST00000437611 948 ntBASIC10.47□□□□□ -0.73
LITAFQ99732 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
LITAFQ99732 BET1L-206ENST00000486280 665 ntTSL 3 BASIC10.47□□□□□ -0.73
LITAFQ99732 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC10.47□□□□□ -0.73
LITAFQ99732 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
LITAFQ99732 TPSP2-201ENST00000561760 610 ntBASIC10.47□□□□□ -0.73
LITAFQ99732 AC002347.1-201ENST00000569543 541 ntBASIC10.47□□□□□ -0.73
LITAFQ99732 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC10.47□□□□□ -0.73
LITAFQ99732 MIR5100-201ENST00000579544 119 ntBASIC10.47□□□□□ -0.73
LITAFQ99732 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC10.47□□□□□ -0.73
LITAFQ99732 AC006011.2-201ENST00000621313 1158 ntBASIC10.47□□□□□ -0.73
LITAFQ99732 CDK20-202ENST00000336654 2176 ntTSL 2 BASIC10.47□□□□□ -0.73
LITAFQ99732 PLCB3-202ENST00000325234 3946 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
LITAFQ99732 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC10.47□□□□□ -0.73
LITAFQ99732 AC016734.2-201ENST00000624325 1377 ntBASIC10.47□□□□□ -0.73
LITAFQ99732 THBS4-201ENST00000350881 3222 ntAPPRIS P3 TSL 1 (best) BASIC10.47□□□□□ -0.73
LITAFQ99732 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC10.47□□□□□ -0.73
LITAFQ99732 LDB3-209ENST00000623056 2314 ntTSL 5 BASIC10.47□□□□□ -0.73
LITAFQ99732 ITPK1-201ENST00000267615 6066 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
LITAFQ99732 PAK6-202ENST00000455577 4215 ntTSL 2 BASIC10.47□□□□□ -0.73
LITAFQ99732 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
LITAFQ99732 ACTR10-201ENST00000254286 2419 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
LITAFQ99732 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
LITAFQ99732 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC10.47□□□□□ -0.73
LITAFQ99732 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC10.47□□□□□ -0.73
LITAFQ99732 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
LITAFQ99732 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC10.47□□□□□ -0.73
LITAFQ99732 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
LITAFQ99732 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
LITAFQ99732 NDUFS7-202ENST00000313408 2818 ntTSL 2 BASIC10.47□□□□□ -0.73
LITAFQ99732 STK3-201ENST00000419617 2826 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
LITAFQ99732 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC10.47□□□□□ -0.73
LITAFQ99732 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC10.47□□□□□ -0.73
LITAFQ99732 CDK2AP1-205ENST00000542174 1812 ntTSL 2 BASIC10.47□□□□□ -0.73
LITAFQ99732 FOXD4L5-201ENST00000377420 3109 ntAPPRIS P1 BASIC10.47□□□□□ -0.73
LITAFQ99732 CBX3-202ENST00000396386 1857 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
LITAFQ99732 VPS36-207ENST00000611132 4607 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
LITAFQ99732 UHRF1BP1-202ENST00000452449 4706 ntAPPRIS ALT2 TSL 5 BASIC10.46□□□□□ -0.73
LITAFQ99732 AC018442.1-201ENST00000421439 2061 ntBASIC10.46□□□□□ -0.73
LITAFQ99732 LINC01225-202ENST00000562339 2113 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
LITAFQ99732 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC10.46□□□□□ -0.73
LITAFQ99732 C4A-259ENST00000498271 5269 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
LITAFQ99732 SEMA4B-201ENST00000332496 3781 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
LITAFQ99732 TNFAIP8L3-201ENST00000327536 2262 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
LITAFQ99732 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC10.46□□□□□ -0.73
LITAFQ99732 SMG9-211ENST00000601170 2387 ntTSL 2 BASIC10.46□□□□□ -0.73
LITAFQ99732 SYT9-201ENST00000318881 3955 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
LITAFQ99732 C19orf57-204ENST00000586783 2454 ntAPPRIS ALT2 TSL 5 BASIC10.46□□□□□ -0.73
LITAFQ99732 CICP11-201ENST00000434745 2827 ntBASIC10.46□□□□□ -0.73
LITAFQ99732 AC008894.2-201ENST00000597983 2987 ntTSL 2 BASIC10.46□□□□□ -0.73
LITAFQ99732 RPS6KA4-201ENST00000334205 3119 ntAPPRIS P3 TSL 1 (best) BASIC10.46□□□□□ -0.73
LITAFQ99732 TGIF2-201ENST00000373872 3406 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
LITAFQ99732 BRSK2-202ENST00000382179 3576 ntTSL 2 BASIC10.46□□□□□ -0.73
LITAFQ99732 SIMC1-205ENST00000443967 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC10.46□□□□□ -0.73
LITAFQ99732 PTGFRN-201ENST00000393203 6178 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
LITAFQ99732 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC10.46□□□□□ -0.73
LITAFQ99732 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
LITAFQ99732 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
LITAFQ99732 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
LITAFQ99732 MIR935-201ENST00000401179 91 ntBASIC10.46□□□□□ -0.73
LITAFQ99732 RPL5P21-201ENST00000404620 815 ntBASIC10.46□□□□□ -0.73
LITAFQ99732 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC10.46□□□□□ -0.73
LITAFQ99732 ELK2BP-201ENST00000415014 1224 ntBASIC10.46□□□□□ -0.73
LITAFQ99732 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC10.46□□□□□ -0.73
LITAFQ99732 AK4P3-201ENST00000418260 669 ntBASIC10.46□□□□□ -0.73
LITAFQ99732 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC10.46□□□□□ -0.73
LITAFQ99732 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC10.46□□□□□ -0.73
LITAFQ99732 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC10.46□□□□□ -0.73
LITAFQ99732 BX276092.5-203ENST00000456199 560 ntBASIC10.46□□□□□ -0.73
LITAFQ99732 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC10.46□□□□□ -0.73
LITAFQ99732 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC10.46□□□□□ -0.73
LITAFQ99732 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC10.46□□□□□ -0.73
LITAFQ99732 CIB2-208ENST00000560618 804 ntTSL 2 BASIC10.46□□□□□ -0.73
LITAFQ99732 AC243562.2-201ENST00000561247 970 ntBASIC10.46□□□□□ -0.73
LITAFQ99732 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC10.46□□□□□ -0.73
LITAFQ99732 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC10.46□□□□□ -0.73
LITAFQ99732 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC10.46□□□□□ -0.73
LITAFQ99732 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC10.46□□□□□ -0.73
LITAFQ99732 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC10.46□□□□□ -0.73
LITAFQ99732 AL121672.3-201ENST00000608644 468 ntBASIC10.46□□□□□ -0.73
LITAFQ99732 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC10.46□□□□□ -0.73
LITAFQ99732 PPP4R4-201ENST00000304338 3868 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
LITAFQ99732 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
LITAFQ99732 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
LITAFQ99732 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC10.46□□□□□ -0.74
LITAFQ99732 CREB3L4-202ENST00000368600 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC10.46□□□□□ -0.74
LITAFQ99732 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC10.46□□□□□ -0.74
LITAFQ99732 AC006504.4-201ENST00000592118 1568 ntBASIC10.46□□□□□ -0.74
LITAFQ99732 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC10.46□□□□□ -0.74
LITAFQ99732 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC10.46□□□□□ -0.74
LITAFQ99732 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC10.46□□□□□ -0.74
LITAFQ99732 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC10.46□□□□□ -0.74
LITAFQ99732 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC10.46□□□□□ -0.74
LITAFQ99732 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
LITAFQ99732 KDM5C-205ENST00000404049 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC10.46□□□□□ -0.74
LITAFQ99732 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
LITAFQ99732 ABHD16A-202ENST00000440843 1906 ntTSL 2 BASIC10.46□□□□□ -0.74
LITAFQ99732 BLOC1S6-212ENST00000566753 1996 ntTSL 2 BASIC10.46□□□□□ -0.74
LITAFQ99732 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Retrieved 100 of 98,524 protein–RNA pairs in 50.9 ms