Protein–RNA interactions for Protein: Q96SZ6

CDK5RAP1, CDK5 regulatory subunit-associated protein 1, humanhuman

Known RBP Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1Q96SZ6 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CDK5RAP1Q96SZ6 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
CDK5RAP1Q96SZ6 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CDK5RAP1Q96SZ6 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.19
CDK5RAP1Q96SZ6 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
CDK5RAP1Q96SZ6 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC16.27■□□□□ 0.19
CDK5RAP1Q96SZ6 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC16.27■□□□□ 0.19
CDK5RAP1Q96SZ6 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.19
CDK5RAP1Q96SZ6 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
CDK5RAP1Q96SZ6 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.19
CDK5RAP1Q96SZ6 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
CDK5RAP1Q96SZ6 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
CDK5RAP1Q96SZ6 TP73-209ENST00000603362 1668 ntTSL 5 BASIC16.27■□□□□ 0.19
CDK5RAP1Q96SZ6 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
CDK5RAP1Q96SZ6 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
CDK5RAP1Q96SZ6 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.19
CDK5RAP1Q96SZ6 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.19
CDK5RAP1Q96SZ6 DZANK1-202ENST00000329494 1389 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CDK5RAP1Q96SZ6 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC16.26■□□□□ 0.19
CDK5RAP1Q96SZ6 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC16.26■□□□□ 0.19
CDK5RAP1Q96SZ6 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CDK5RAP1Q96SZ6 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CDK5RAP1Q96SZ6 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC16.26■□□□□ 0.19
CDK5RAP1Q96SZ6 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CDK5RAP1Q96SZ6 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CDK5RAP1Q96SZ6 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CDK5RAP1Q96SZ6 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
CDK5RAP1Q96SZ6 BLCAP-202ENST00000397131 633 ntAPPRIS P1 TSL 3 BASIC16.26■□□□□ 0.19
CDK5RAP1Q96SZ6 BLCAP-203ENST00000397134 566 ntAPPRIS P1 TSL 4 BASIC16.26■□□□□ 0.19
CDK5RAP1Q96SZ6 C1QBPP1-201ENST00000400117 770 ntBASIC16.26■□□□□ 0.19
CDK5RAP1Q96SZ6 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC16.26■□□□□ 0.19
CDK5RAP1Q96SZ6 CC2D2B-203ENST00000423344 1241 ntTSL 2 BASIC16.26■□□□□ 0.19
CDK5RAP1Q96SZ6 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC16.26■□□□□ 0.19
CDK5RAP1Q96SZ6 TMEM191A-209ENST00000452055 788 ntTSL 2 BASIC16.26■□□□□ 0.19
CDK5RAP1Q96SZ6 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
CDK5RAP1Q96SZ6 MDH2-205ENST00000461263 648 ntTSL 2 BASIC16.26■□□□□ 0.19
CDK5RAP1Q96SZ6 GIMAP3P-201ENST00000495150 836 ntBASIC16.26■□□□□ 0.19
CDK5RAP1Q96SZ6 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC16.26■□□□□ 0.19
CDK5RAP1Q96SZ6 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC16.26■□□□□ 0.19
CDK5RAP1Q96SZ6 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CDK5RAP1Q96SZ6 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC16.26■□□□□ 0.19
CDK5RAP1Q96SZ6 AC120045.2-201ENST00000567334 178 ntBASIC16.26■□□□□ 0.19
CDK5RAP1Q96SZ6 PAM16-204ENST00000571941 674 ntTSL 3 BASIC16.26■□□□□ 0.19
CDK5RAP1Q96SZ6 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC16.26■□□□□ 0.19
CDK5RAP1Q96SZ6 AC005544.2-201ENST00000579138 229 ntTSL 5 BASIC16.26■□□□□ 0.19
CDK5RAP1Q96SZ6 TBCB-211ENST00000589996 724 ntTSL 3 BASIC16.26■□□□□ 0.19
CDK5RAP1Q96SZ6 AC015936.2-201ENST00000593177 259 ntBASIC16.26■□□□□ 0.19
CDK5RAP1Q96SZ6 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC16.26■□□□□ 0.19
CDK5RAP1Q96SZ6 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CDK5RAP1Q96SZ6 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
CDK5RAP1Q96SZ6 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CDK5RAP1Q96SZ6 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC16.26■□□□□ 0.19
CDK5RAP1Q96SZ6 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC16.26■□□□□ 0.19
CDK5RAP1Q96SZ6 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC16.26■□□□□ 0.19
CDK5RAP1Q96SZ6 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CDK5RAP1Q96SZ6 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC16.26■□□□□ 0.19
CDK5RAP1Q96SZ6 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CDK5RAP1Q96SZ6 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
CDK5RAP1Q96SZ6 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CDK5RAP1Q96SZ6 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CDK5RAP1Q96SZ6 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
CDK5RAP1Q96SZ6 AC010491.1-201ENST00000563101 2797 ntBASIC16.26■□□□□ 0.19
CDK5RAP1Q96SZ6 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CDK5RAP1Q96SZ6 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC16.26■□□□□ 0.19
CDK5RAP1Q96SZ6 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC16.26■□□□□ 0.19
CDK5RAP1Q96SZ6 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
CDK5RAP1Q96SZ6 DOC2GP-204ENST00000639052 2548 ntBASIC16.25■□□□□ 0.19
CDK5RAP1Q96SZ6 LINC00668-205ENST00000581571 1748 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CDK5RAP1Q96SZ6 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CDK5RAP1Q96SZ6 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CDK5RAP1Q96SZ6 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CDK5RAP1Q96SZ6 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
CDK5RAP1Q96SZ6 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CDK5RAP1Q96SZ6 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC16.25■□□□□ 0.19
CDK5RAP1Q96SZ6 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
CDK5RAP1Q96SZ6 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CDK5RAP1Q96SZ6 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
CDK5RAP1Q96SZ6 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
CDK5RAP1Q96SZ6 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
CDK5RAP1Q96SZ6 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC16.25■□□□□ 0.19
CDK5RAP1Q96SZ6 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC16.25■□□□□ 0.19
CDK5RAP1Q96SZ6 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CDK5RAP1Q96SZ6 MRPL53-201ENST00000258105 1162 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CDK5RAP1Q96SZ6 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
CDK5RAP1Q96SZ6 APOA1-205ENST00000375329 927 ntTSL 2 BASIC16.25■□□□□ 0.19
CDK5RAP1Q96SZ6 VDAC1P7-201ENST00000462417 847 ntBASIC16.25■□□□□ 0.19
CDK5RAP1Q96SZ6 RN7SL837P-201ENST00000463010 287 ntBASIC16.25■□□□□ 0.19
CDK5RAP1Q96SZ6 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC16.25■□□□□ 0.19
CDK5RAP1Q96SZ6 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC16.25■□□□□ 0.19
CDK5RAP1Q96SZ6 TIMM8B-201ENST00000504148 819 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CDK5RAP1Q96SZ6 AC026410.3-201ENST00000514280 936 ntBASIC16.25■□□□□ 0.19
CDK5RAP1Q96SZ6 LEPROTL1-204ENST00000518192 847 ntTSL 3 BASIC16.25■□□□□ 0.19
CDK5RAP1Q96SZ6 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC16.25■□□□□ 0.19
CDK5RAP1Q96SZ6 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CDK5RAP1Q96SZ6 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC16.25■□□□□ 0.19
CDK5RAP1Q96SZ6 CSF1R-209ENST00000543093 921 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CDK5RAP1Q96SZ6 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CDK5RAP1Q96SZ6 AC124283.3-201ENST00000570869 594 ntBASIC16.25■□□□□ 0.19
CDK5RAP1Q96SZ6 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
CDK5RAP1Q96SZ6 GPX4-206ENST00000588919 803 ntTSL 2 BASIC16.25■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 47.5 ms