Protein–RNA interactions for Protein: Q96FF9

CDCA5, Sororin, humanhuman

Predictions only

Length 252 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA5Q96FF9 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC18.11■□□□□ 0.49
CDCA5Q96FF9 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
CDCA5Q96FF9 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
CDCA5Q96FF9 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CDCA5Q96FF9 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
CDCA5Q96FF9 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
CDCA5Q96FF9 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC18.1■□□□□ 0.49
CDCA5Q96FF9 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
CDCA5Q96FF9 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CDCA5Q96FF9 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CDCA5Q96FF9 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC18.1■□□□□ 0.49
CDCA5Q96FF9 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CDCA5Q96FF9 TUBA3D-201ENST00000321253 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CDCA5Q96FF9 MPV17-201ENST00000233545 998 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CDCA5Q96FF9 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
CDCA5Q96FF9 C1QB-201ENST00000314933 1044 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CDCA5Q96FF9 SDHAF4-201ENST00000370474 1196 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CDCA5Q96FF9 NPPA-201ENST00000376476 728 ntTSL 3 BASIC18.1■□□□□ 0.49
CDCA5Q96FF9 AL645937.2-201ENST00000396808 931 ntBASIC18.1■□□□□ 0.49
CDCA5Q96FF9 AC073316.1-202ENST00000402115 988 ntTSL 5 BASIC18.1■□□□□ 0.49
CDCA5Q96FF9 LSM5-207ENST00000410044 687 ntTSL 3 BASIC18.1■□□□□ 0.49
CDCA5Q96FF9 NREP-204ENST00000419114 704 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
CDCA5Q96FF9 Z82214.1-201ENST00000419643 988 ntTSL 3 BASIC18.1■□□□□ 0.49
CDCA5Q96FF9 SRSF10-211ENST00000484146 1089 ntTSL 2 BASIC18.1■□□□□ 0.49
CDCA5Q96FF9 CLDN11-207ENST00000486975 1139 ntTSL 2 BASIC18.1■□□□□ 0.49
CDCA5Q96FF9 CHCHD7-211ENST00000521831 573 ntTSL 2 BASIC18.1■□□□□ 0.49
CDCA5Q96FF9 NDUFC1-210ENST00000539387 725 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
CDCA5Q96FF9 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC18.1■□□□□ 0.49
CDCA5Q96FF9 AC126696.1-201ENST00000561567 756 ntTSL 3 BASIC18.1■□□□□ 0.49
CDCA5Q96FF9 CENPX-208ENST00000584347 799 ntTSL 2 BASIC18.1■□□□□ 0.49
CDCA5Q96FF9 INO80C-210ENST00000590757 595 ntTSL 2 BASIC18.1■□□□□ 0.49
CDCA5Q96FF9 MBD3L2B-202ENST00000637800 774 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CDCA5Q96FF9 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
CDCA5Q96FF9 AC092171.3-201ENST00000610122 2651 ntBASIC18.1■□□□□ 0.49
CDCA5Q96FF9 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CDCA5Q96FF9 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC18.1■□□□□ 0.49
CDCA5Q96FF9 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC18.1■□□□□ 0.49
CDCA5Q96FF9 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CDCA5Q96FF9 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CDCA5Q96FF9 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CDCA5Q96FF9 PLCXD2-204ENST00000477665 1721 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CDCA5Q96FF9 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC18.09■□□□□ 0.49
CDCA5Q96FF9 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CDCA5Q96FF9 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC18.09■□□□□ 0.49
CDCA5Q96FF9 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
CDCA5Q96FF9 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
CDCA5Q96FF9 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CDCA5Q96FF9 TMBIM1-201ENST00000258412 2371 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CDCA5Q96FF9 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CDCA5Q96FF9 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC18.09■□□□□ 0.49
CDCA5Q96FF9 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
CDCA5Q96FF9 C6orf52-201ENST00000259983 619 ntAPPRIS P2 TSL 5 BASIC18.09■□□□□ 0.49
CDCA5Q96FF9 MBD3L5-201ENST00000329753 778 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CDCA5Q96FF9 LYPLA2-202ENST00000374502 1072 ntTSL 2 BASIC18.09■□□□□ 0.49
CDCA5Q96FF9 CSH2-203ENST00000392886 920 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CDCA5Q96FF9 AC131097.3-203ENST00000420272 1193 ntTSL 5 BASIC18.09■□□□□ 0.49
CDCA5Q96FF9 AL139246.4-201ENST00000442305 514 ntTSL 3 BASIC18.09■□□□□ 0.49
CDCA5Q96FF9 AC104073.2-201ENST00000453737 312 ntBASIC18.09■□□□□ 0.49
CDCA5Q96FF9 PFN2-205ENST00000461868 613 ntTSL 2 BASIC18.09■□□□□ 0.49
CDCA5Q96FF9 AC004066.1-201ENST00000502488 802 ntBASIC18.09■□□□□ 0.49
CDCA5Q96FF9 NDUFC2-204ENST00000528164 561 ntTSL 2 BASIC18.09■□□□□ 0.49
CDCA5Q96FF9 CSH2-206ENST00000560142 749 ntTSL 5 BASIC18.09■□□□□ 0.49
CDCA5Q96FF9 SELENOW-204ENST00000595615 535 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CDCA5Q96FF9 NEAT1-203ENST00000601801 487 ntTSL 4 BASIC18.09■□□□□ 0.49
CDCA5Q96FF9 SELENOW-216ENST00000612212 875 ntTSL 5 BASIC18.09■□□□□ 0.49
CDCA5Q96FF9 ANGPTL8-204ENST00000616433 1223 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CDCA5Q96FF9 AC004923.1-202ENST00000642106 209 ntBASIC18.09■□□□□ 0.49
CDCA5Q96FF9 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
CDCA5Q96FF9 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
CDCA5Q96FF9 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CDCA5Q96FF9 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CDCA5Q96FF9 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CDCA5Q96FF9 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
CDCA5Q96FF9 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
CDCA5Q96FF9 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC18.09■□□□□ 0.49
CDCA5Q96FF9 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC18.09■□□□□ 0.49
CDCA5Q96FF9 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CDCA5Q96FF9 AC022188.1-201ENST00000620960 1664 ntBASIC18.09■□□□□ 0.49
CDCA5Q96FF9 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CDCA5Q96FF9 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CDCA5Q96FF9 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC18.09■□□□□ 0.49
CDCA5Q96FF9 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
CDCA5Q96FF9 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC18.08■□□□□ 0.49
CDCA5Q96FF9 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC18.08■□□□□ 0.49
CDCA5Q96FF9 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.49
CDCA5Q96FF9 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
CDCA5Q96FF9 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC18.08■□□□□ 0.49
CDCA5Q96FF9 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
CDCA5Q96FF9 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
CDCA5Q96FF9 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
CDCA5Q96FF9 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC18.08■□□□□ 0.48
CDCA5Q96FF9 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC18.08■□□□□ 0.48
CDCA5Q96FF9 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC18.08■□□□□ 0.48
CDCA5Q96FF9 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC18.08■□□□□ 0.48
CDCA5Q96FF9 RAB40AL-201ENST00000218249 1029 ntAPPRIS P1 BASIC18.08■□□□□ 0.48
CDCA5Q96FF9 MYL12B-201ENST00000237500 1210 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CDCA5Q96FF9 CRYBA4-201ENST00000354760 811 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CDCA5Q96FF9 IL27-201ENST00000356897 1044 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.48
CDCA5Q96FF9 AL136309.1-201ENST00000403917 691 ntBASIC18.08■□□□□ 0.48
CDCA5Q96FF9 AC093151.3-202ENST00000445073 709 ntTSL 3 BASIC18.08■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 56.2 ms