Protein–RNA interactions for Protein: Q96FC9

DDX11, ATP-dependent DNA helicase DDX11, humanhuman

Predictions only

Length 970 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11Q96FC9 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
DDX11Q96FC9 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
DDX11Q96FC9 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
DDX11Q96FC9 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
DDX11Q96FC9 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC18.71■□□□□ 0.59
DDX11Q96FC9 AC007541.1-201ENST00000570282 1469 ntBASIC18.71■□□□□ 0.59
DDX11Q96FC9 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC18.7■□□□□ 0.58
DDX11Q96FC9 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
DDX11Q96FC9 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC18.7■□□□□ 0.58
DDX11Q96FC9 AC126177.1-201ENST00000547829 2218 ntBASIC18.7■□□□□ 0.58
DDX11Q96FC9 ME2-201ENST00000321341 9415 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
DDX11Q96FC9 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
DDX11Q96FC9 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
DDX11Q96FC9 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
DDX11Q96FC9 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC18.7■□□□□ 0.58
DDX11Q96FC9 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC18.7■□□□□ 0.58
DDX11Q96FC9 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
DDX11Q96FC9 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
DDX11Q96FC9 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
DDX11Q96FC9 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC18.7■□□□□ 0.58
DDX11Q96FC9 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC18.7■□□□□ 0.58
DDX11Q96FC9 NME2P1-201ENST00000426182 414 ntBASIC18.7■□□□□ 0.58
DDX11Q96FC9 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC18.7■□□□□ 0.58
DDX11Q96FC9 MDH2-205ENST00000461263 648 ntTSL 2 BASIC18.7■□□□□ 0.58
DDX11Q96FC9 LEPROTL1-204ENST00000518192 847 ntTSL 3 BASIC18.7■□□□□ 0.58
DDX11Q96FC9 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
DDX11Q96FC9 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC18.7■□□□□ 0.58
DDX11Q96FC9 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC18.7■□□□□ 0.58
DDX11Q96FC9 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
DDX11Q96FC9 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
DDX11Q96FC9 FAM66A-202ENST00000602658 546 ntTSL 5 BASIC18.7■□□□□ 0.58
DDX11Q96FC9 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC18.7■□□□□ 0.58
DDX11Q96FC9 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
DDX11Q96FC9 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
DDX11Q96FC9 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC18.7■□□□□ 0.58
DDX11Q96FC9 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
DDX11Q96FC9 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC18.7■□□□□ 0.58
DDX11Q96FC9 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
DDX11Q96FC9 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC18.7■□□□□ 0.58
DDX11Q96FC9 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
DDX11Q96FC9 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
DDX11Q96FC9 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC18.7■□□□□ 0.58
DDX11Q96FC9 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC18.69■□□□□ 0.58
DDX11Q96FC9 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
DDX11Q96FC9 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
DDX11Q96FC9 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
DDX11Q96FC9 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
DDX11Q96FC9 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
DDX11Q96FC9 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
DDX11Q96FC9 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
DDX11Q96FC9 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
DDX11Q96FC9 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
DDX11Q96FC9 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC18.69■□□□□ 0.58
DDX11Q96FC9 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
DDX11Q96FC9 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
DDX11Q96FC9 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
DDX11Q96FC9 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
DDX11Q96FC9 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
DDX11Q96FC9 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC18.69■□□□□ 0.58
DDX11Q96FC9 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC18.69■□□□□ 0.58
DDX11Q96FC9 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
DDX11Q96FC9 NDUFB8-202ENST00000370320 684 ntTSL 3 BASIC18.69■□□□□ 0.58
DDX11Q96FC9 RBM39-205ENST00000397370 612 ntTSL 2 BASIC18.69■□□□□ 0.58
DDX11Q96FC9 RPUSD3-204ENST00000424438 1005 ntTSL 2 BASIC18.69■□□□□ 0.58
DDX11Q96FC9 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC18.69■□□□□ 0.58
DDX11Q96FC9 AC135586.1-201ENST00000539323 574 ntBASIC18.69■□□□□ 0.58
DDX11Q96FC9 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC18.69■□□□□ 0.58
DDX11Q96FC9 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
DDX11Q96FC9 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
DDX11Q96FC9 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
DDX11Q96FC9 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
DDX11Q96FC9 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC18.69■□□□□ 0.58
DDX11Q96FC9 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC18.69■□□□□ 0.58
DDX11Q96FC9 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
DDX11Q96FC9 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC18.69■□□□□ 0.58
DDX11Q96FC9 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
DDX11Q96FC9 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
DDX11Q96FC9 ZBTB45P2-201ENST00000452245 1531 ntBASIC18.69■□□□□ 0.58
DDX11Q96FC9 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
DDX11Q96FC9 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
DDX11Q96FC9 PGR-210ENST00000619228 3038 ntTSL 5 BASIC18.68■□□□□ 0.58
DDX11Q96FC9 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
DDX11Q96FC9 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC18.68■□□□□ 0.58
DDX11Q96FC9 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
DDX11Q96FC9 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
DDX11Q96FC9 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
DDX11Q96FC9 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC18.68■□□□□ 0.58
DDX11Q96FC9 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
DDX11Q96FC9 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC18.68■□□□□ 0.58
DDX11Q96FC9 OR4D1-202ENST00000641449 4925 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
DDX11Q96FC9 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
DDX11Q96FC9 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC18.68■□□□□ 0.58
DDX11Q96FC9 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
DDX11Q96FC9 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
DDX11Q96FC9 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC18.68■□□□□ 0.58
DDX11Q96FC9 ADIRF-201ENST00000372013 917 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
DDX11Q96FC9 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
DDX11Q96FC9 AL080243.2-201ENST00000418783 582 ntBASIC18.68■□□□□ 0.58
DDX11Q96FC9 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC18.68■□□□□ 0.58
DDX11Q96FC9 HEBP2-202ENST00000448741 661 ntTSL 5 BASIC18.68■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 40.4 ms