Protein–RNA interactions for Protein: Q8WXF7

ATL1, Atlastin-1, humanhuman

Predictions only

Length 558 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATL1Q8WXF7 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
ATL1Q8WXF7 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
ATL1Q8WXF7 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC15.4■□□□□ 0.06
ATL1Q8WXF7 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
ATL1Q8WXF7 AL080243.2-201ENST00000418783 582 ntBASIC15.4■□□□□ 0.06
ATL1Q8WXF7 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC15.4■□□□□ 0.06
ATL1Q8WXF7 HIST3H2BA-201ENST00000436555 524 ntBASIC15.4■□□□□ 0.06
ATL1Q8WXF7 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
ATL1Q8WXF7 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC15.4■□□□□ 0.06
ATL1Q8WXF7 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC15.4■□□□□ 0.06
ATL1Q8WXF7 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC15.4■□□□□ 0.06
ATL1Q8WXF7 AC140878.1-201ENST00000565277 250 ntBASIC15.4■□□□□ 0.06
ATL1Q8WXF7 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC15.4■□□□□ 0.06
ATL1Q8WXF7 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
ATL1Q8WXF7 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC15.4■□□□□ 0.06
ATL1Q8WXF7 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC15.4■□□□□ 0.06
ATL1Q8WXF7 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC15.4■□□□□ 0.06
ATL1Q8WXF7 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
ATL1Q8WXF7 TEAD3-201ENST00000338863 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
ATL1Q8WXF7 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC15.4■□□□□ 0.06
ATL1Q8WXF7 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
ATL1Q8WXF7 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
ATL1Q8WXF7 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
ATL1Q8WXF7 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
ATL1Q8WXF7 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
ATL1Q8WXF7 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
ATL1Q8WXF7 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
ATL1Q8WXF7 AC022532.1-201ENST00000624563 1728 ntBASIC15.4■□□□□ 0.06
ATL1Q8WXF7 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
ATL1Q8WXF7 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
ATL1Q8WXF7 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
ATL1Q8WXF7 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
ATL1Q8WXF7 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC15.39■□□□□ 0.05
ATL1Q8WXF7 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
ATL1Q8WXF7 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
ATL1Q8WXF7 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
ATL1Q8WXF7 SPON1-201ENST00000576479 4837 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
ATL1Q8WXF7 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC15.39■□□□□ 0.05
ATL1Q8WXF7 AC105250.1-201ENST00000509378 2057 ntBASIC15.39■□□□□ 0.05
ATL1Q8WXF7 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
ATL1Q8WXF7 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC15.39■□□□□ 0.05
ATL1Q8WXF7 SIK1-201ENST00000270162 4712 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
ATL1Q8WXF7 NF2-210ENST00000413209 4733 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
ATL1Q8WXF7 CU639417.2-201ENST00000613488 4705 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
ATL1Q8WXF7 AC126177.1-201ENST00000547829 2218 ntBASIC15.39■□□□□ 0.05
ATL1Q8WXF7 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC15.39■□□□□ 0.05
ATL1Q8WXF7 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
ATL1Q8WXF7 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
ATL1Q8WXF7 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
ATL1Q8WXF7 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
ATL1Q8WXF7 BAD-202ENST00000394531 631 ntTSL 3 BASIC15.39■□□□□ 0.05
ATL1Q8WXF7 AC107890.1-201ENST00000422478 521 ntBASIC15.39■□□□□ 0.05
ATL1Q8WXF7 AL645939.2-201ENST00000427340 991 ntBASIC15.39■□□□□ 0.05
ATL1Q8WXF7 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
ATL1Q8WXF7 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC15.39■□□□□ 0.05
ATL1Q8WXF7 FAM86GP-201ENST00000448322 971 ntBASIC15.39■□□□□ 0.05
ATL1Q8WXF7 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC15.39■□□□□ 0.05
ATL1Q8WXF7 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC15.39■□□□□ 0.05
ATL1Q8WXF7 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
ATL1Q8WXF7 AC069120.2-201ENST00000524091 540 ntBASIC15.39■□□□□ 0.05
ATL1Q8WXF7 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
ATL1Q8WXF7 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC15.39■□□□□ 0.05
ATL1Q8WXF7 BAD-207ENST00000544785 525 ntTSL 3 BASIC15.39■□□□□ 0.05
ATL1Q8WXF7 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC15.39■□□□□ 0.05
ATL1Q8WXF7 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC15.39■□□□□ 0.05
ATL1Q8WXF7 AC073592.8-201ENST00000624126 511 ntBASIC15.39■□□□□ 0.05
ATL1Q8WXF7 AL033527.5-202ENST00000641632 1098 ntBASIC15.39■□□□□ 0.05
ATL1Q8WXF7 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
ATL1Q8WXF7 COMP-203ENST00000542601 2707 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
ATL1Q8WXF7 OPA1-201ENST00000361150 6330 ntTSL 5 BASIC15.39■□□□□ 0.05
ATL1Q8WXF7 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC15.39■□□□□ 0.05
ATL1Q8WXF7 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
ATL1Q8WXF7 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC15.39■□□□□ 0.05
ATL1Q8WXF7 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
ATL1Q8WXF7 MAP3K4-202ENST00000366919 5397 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
ATL1Q8WXF7 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
ATL1Q8WXF7 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC15.39■□□□□ 0.05
ATL1Q8WXF7 PPM1F-203ENST00000407142 5587 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
ATL1Q8WXF7 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
ATL1Q8WXF7 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
ATL1Q8WXF7 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC15.39■□□□□ 0.05
ATL1Q8WXF7 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
ATL1Q8WXF7 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
ATL1Q8WXF7 LHFPL2-207ENST00000515007 4680 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
ATL1Q8WXF7 EML1-201ENST00000262233 4535 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
ATL1Q8WXF7 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
ATL1Q8WXF7 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC15.38■□□□□ 0.05
ATL1Q8WXF7 AMZ1-201ENST00000312371 5516 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
ATL1Q8WXF7 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
ATL1Q8WXF7 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC15.38■□□□□ 0.05
ATL1Q8WXF7 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
ATL1Q8WXF7 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC15.38■□□□□ 0.05
ATL1Q8WXF7 SPOCK1-202ENST00000394945 4846 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
ATL1Q8WXF7 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC15.38■□□□□ 0.05
ATL1Q8WXF7 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
ATL1Q8WXF7 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
ATL1Q8WXF7 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC15.38■□□□□ 0.05
ATL1Q8WXF7 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
ATL1Q8WXF7 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC15.38■□□□□ 0.05
ATL1Q8WXF7 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 72.7 ms