Protein–RNA interactions for Protein: Q8TDR0

TRAF3IP1, TRAF3-interacting protein 1, humanhuman

Predicted RBP Predictions only

Length 691 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP1Q8TDR0 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC16.45■□□□□ 0.22
TRAF3IP1Q8TDR0 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
TRAF3IP1Q8TDR0 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
TRAF3IP1Q8TDR0 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
TRAF3IP1Q8TDR0 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC16.45■□□□□ 0.22
TRAF3IP1Q8TDR0 KCNMA1-262ENST00000639489 4302 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
TRAF3IP1Q8TDR0 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TRAF3IP1Q8TDR0 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
TRAF3IP1Q8TDR0 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
TRAF3IP1Q8TDR0 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
TRAF3IP1Q8TDR0 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
TRAF3IP1Q8TDR0 AKNA-206ENST00000374088 5464 ntAPPRIS P2 TSL 2 BASIC16.44■□□□□ 0.22
TRAF3IP1Q8TDR0 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC16.44■□□□□ 0.22
TRAF3IP1Q8TDR0 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
TRAF3IP1Q8TDR0 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
TRAF3IP1Q8TDR0 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
TRAF3IP1Q8TDR0 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
TRAF3IP1Q8TDR0 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
TRAF3IP1Q8TDR0 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC16.44■□□□□ 0.22
TRAF3IP1Q8TDR0 AL513477.1-201ENST00000602865 2407 ntBASIC16.44■□□□□ 0.22
TRAF3IP1Q8TDR0 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
TRAF3IP1Q8TDR0 GSN-206ENST00000394353 2311 ntTSL 2 BASIC16.44■□□□□ 0.22
TRAF3IP1Q8TDR0 RPL30-202ENST00000396070 440 ntTSL 2 BASIC16.44■□□□□ 0.22
TRAF3IP1Q8TDR0 RBM39-205ENST00000397370 612 ntTSL 2 BASIC16.44■□□□□ 0.22
TRAF3IP1Q8TDR0 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC16.44■□□□□ 0.22
TRAF3IP1Q8TDR0 RPP21-221ENST00000428040 594 ntTSL 2 BASIC16.44■□□□□ 0.22
TRAF3IP1Q8TDR0 MTND6P24-201ENST00000440466 518 ntBASIC16.44■□□□□ 0.22
TRAF3IP1Q8TDR0 SPDYE14P-201ENST00000442619 822 ntBASIC16.44■□□□□ 0.22
TRAF3IP1Q8TDR0 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
TRAF3IP1Q8TDR0 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC16.44■□□□□ 0.22
TRAF3IP1Q8TDR0 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC16.44■□□□□ 0.22
TRAF3IP1Q8TDR0 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC16.44■□□□□ 0.22
TRAF3IP1Q8TDR0 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC16.44■□□□□ 0.22
TRAF3IP1Q8TDR0 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
TRAF3IP1Q8TDR0 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC16.44■□□□□ 0.22
TRAF3IP1Q8TDR0 HADH-212ENST00000638621 741 ntTSL 5 BASIC16.44■□□□□ 0.22
TRAF3IP1Q8TDR0 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC16.44■□□□□ 0.22
TRAF3IP1Q8TDR0 MINDY2-203ENST00000559228 9238 ntAPPRIS P3 TSL 2 BASIC16.44■□□□□ 0.22
TRAF3IP1Q8TDR0 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC16.44■□□□□ 0.22
TRAF3IP1Q8TDR0 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
TRAF3IP1Q8TDR0 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC16.44■□□□□ 0.22
TRAF3IP1Q8TDR0 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC16.44■□□□□ 0.22
TRAF3IP1Q8TDR0 SEC16A-202ENST00000290037 8982 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
TRAF3IP1Q8TDR0 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
TRAF3IP1Q8TDR0 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
TRAF3IP1Q8TDR0 DEF8-210ENST00000563594 4450 ntAPPRIS P4 TSL 1 (best) BASIC16.44■□□□□ 0.22
TRAF3IP1Q8TDR0 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
TRAF3IP1Q8TDR0 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC16.44■□□□□ 0.22
TRAF3IP1Q8TDR0 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC16.44■□□□□ 0.22
TRAF3IP1Q8TDR0 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
TRAF3IP1Q8TDR0 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC16.44■□□□□ 0.22
TRAF3IP1Q8TDR0 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC16.43■□□□□ 0.22
TRAF3IP1Q8TDR0 SEMA5B-206ENST00000451055 4579 ntAPPRIS ALT2 TSL 2 BASIC16.43■□□□□ 0.22
TRAF3IP1Q8TDR0 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
TRAF3IP1Q8TDR0 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
TRAF3IP1Q8TDR0 AC103702.1-201ENST00000548801 2630 ntBASIC16.43■□□□□ 0.22
TRAF3IP1Q8TDR0 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
TRAF3IP1Q8TDR0 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TRAF3IP1Q8TDR0 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TRAF3IP1Q8TDR0 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
TRAF3IP1Q8TDR0 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
TRAF3IP1Q8TDR0 AC254562.1-201ENST00000417586 456 ntBASIC16.43■□□□□ 0.22
TRAF3IP1Q8TDR0 SPDYE7P-202ENST00000420373 878 ntBASIC16.43■□□□□ 0.22
TRAF3IP1Q8TDR0 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC16.43■□□□□ 0.22
TRAF3IP1Q8TDR0 GPS2P2-201ENST00000430745 888 ntBASIC16.43■□□□□ 0.22
TRAF3IP1Q8TDR0 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
TRAF3IP1Q8TDR0 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC16.43■□□□□ 0.22
TRAF3IP1Q8TDR0 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC16.43■□□□□ 0.22
TRAF3IP1Q8TDR0 SNHG9-202ENST00000564014 471 ntBASIC16.43■□□□□ 0.22
TRAF3IP1Q8TDR0 LITAF-210ENST00000571976 548 ntTSL 2 BASIC16.43■□□□□ 0.22
TRAF3IP1Q8TDR0 LITAF-214ENST00000574703 486 ntTSL 2 BASIC16.43■□□□□ 0.22
TRAF3IP1Q8TDR0 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TRAF3IP1Q8TDR0 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
TRAF3IP1Q8TDR0 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
TRAF3IP1Q8TDR0 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC16.43■□□□□ 0.22
TRAF3IP1Q8TDR0 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TRAF3IP1Q8TDR0 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TRAF3IP1Q8TDR0 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
TRAF3IP1Q8TDR0 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC16.43■□□□□ 0.22
TRAF3IP1Q8TDR0 AUTS2-218ENST00000615871 4511 ntTSL 5 BASIC16.43■□□□□ 0.22
TRAF3IP1Q8TDR0 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
TRAF3IP1Q8TDR0 EPB41L3-206ENST00000544123 3972 ntAPPRIS ALT2 TSL 2 BASIC16.43■□□□□ 0.22
TRAF3IP1Q8TDR0 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
TRAF3IP1Q8TDR0 GLIS2-201ENST00000262366 4469 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
TRAF3IP1Q8TDR0 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TRAF3IP1Q8TDR0 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
TRAF3IP1Q8TDR0 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
TRAF3IP1Q8TDR0 RTEL1-201ENST00000318100 4676 ntTSL 2 BASIC16.43■□□□□ 0.22
TRAF3IP1Q8TDR0 C3-201ENST00000245907 5263 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TRAF3IP1Q8TDR0 MAP3K4-201ENST00000348824 5295 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
TRAF3IP1Q8TDR0 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
TRAF3IP1Q8TDR0 RTEL1-205ENST00000370018 4955 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
TRAF3IP1Q8TDR0 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
TRAF3IP1Q8TDR0 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
TRAF3IP1Q8TDR0 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC16.42■□□□□ 0.22
TRAF3IP1Q8TDR0 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC16.42■□□□□ 0.22
TRAF3IP1Q8TDR0 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC16.42■□□□□ 0.22
TRAF3IP1Q8TDR0 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC16.42■□□□□ 0.22
TRAF3IP1Q8TDR0 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC16.42■□□□□ 0.22
TRAF3IP1Q8TDR0 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 41.8 ms