Protein–RNA interactions for Protein: Q8TBE3

FNDC9, Fibronectin type III domain-containing protein 9, humanhuman

Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC9Q8TBE3 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
FNDC9Q8TBE3 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
FNDC9Q8TBE3 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
FNDC9Q8TBE3 KCTD15-201ENST00000284006 4918 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
FNDC9Q8TBE3 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
FNDC9Q8TBE3 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC14.2□□□□□ -0.14
FNDC9Q8TBE3 CDS2-203ENST00000460006 9298 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
FNDC9Q8TBE3 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
FNDC9Q8TBE3 DCTN1-203ENST00000409240 4365 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
FNDC9Q8TBE3 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
FNDC9Q8TBE3 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
FNDC9Q8TBE3 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC14.2□□□□□ -0.14
FNDC9Q8TBE3 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
FNDC9Q8TBE3 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC14.2□□□□□ -0.14
FNDC9Q8TBE3 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
FNDC9Q8TBE3 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
FNDC9Q8TBE3 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
FNDC9Q8TBE3 OSM-203ENST00000403463 464 ntTSL 3 BASIC14.2□□□□□ -0.14
FNDC9Q8TBE3 AC015922.1-201ENST00000421102 1152 ntBASIC14.2□□□□□ -0.14
FNDC9Q8TBE3 PHKG1P2-201ENST00000457537 863 ntBASIC14.2□□□□□ -0.14
FNDC9Q8TBE3 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC14.2□□□□□ -0.14
FNDC9Q8TBE3 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC14.2□□□□□ -0.14
FNDC9Q8TBE3 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC14.2□□□□□ -0.14
FNDC9Q8TBE3 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC14.2□□□□□ -0.14
FNDC9Q8TBE3 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC14.2□□□□□ -0.14
FNDC9Q8TBE3 AL450472.2-201ENST00000603663 1156 ntBASIC14.2□□□□□ -0.14
FNDC9Q8TBE3 SAP130-201ENST00000259234 4140 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
FNDC9Q8TBE3 UBXN2B-201ENST00000399598 5068 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
FNDC9Q8TBE3 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
FNDC9Q8TBE3 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC14.2□□□□□ -0.14
FNDC9Q8TBE3 UBE3A-207ENST00000614096 8741 ntAPPRIS ALT1 TSL 1 (best) BASIC14.2□□□□□ -0.14
FNDC9Q8TBE3 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
FNDC9Q8TBE3 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
FNDC9Q8TBE3 MYH11-211ENST00000576790 6272 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
FNDC9Q8TBE3 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC14.2□□□□□ -0.14
FNDC9Q8TBE3 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
FNDC9Q8TBE3 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC14.2□□□□□ -0.14
FNDC9Q8TBE3 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
FNDC9Q8TBE3 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
FNDC9Q8TBE3 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC14.2□□□□□ -0.14
FNDC9Q8TBE3 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
FNDC9Q8TBE3 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC14.19□□□□□ -0.14
FNDC9Q8TBE3 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC14.19□□□□□ -0.14
FNDC9Q8TBE3 Z97205.2-201ENST00000564697 1639 ntBASIC14.19□□□□□ -0.14
FNDC9Q8TBE3 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
FNDC9Q8TBE3 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
FNDC9Q8TBE3 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
FNDC9Q8TBE3 NR4A3-201ENST00000330847 4982 ntAPPRIS P4 TSL 5 BASIC14.19□□□□□ -0.14
FNDC9Q8TBE3 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC14.19□□□□□ -0.14
FNDC9Q8TBE3 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
FNDC9Q8TBE3 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC14.19□□□□□ -0.14
FNDC9Q8TBE3 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
FNDC9Q8TBE3 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
FNDC9Q8TBE3 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC14.19□□□□□ -0.14
FNDC9Q8TBE3 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
FNDC9Q8TBE3 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
FNDC9Q8TBE3 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC14.19□□□□□ -0.14
FNDC9Q8TBE3 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC14.19□□□□□ -0.14
FNDC9Q8TBE3 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC14.19□□□□□ -0.14
FNDC9Q8TBE3 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC14.19□□□□□ -0.14
FNDC9Q8TBE3 LATS2-201ENST00000382592 5511 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
FNDC9Q8TBE3 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
FNDC9Q8TBE3 AL589987.1-201ENST00000453380 819 ntBASIC14.19□□□□□ -0.14
FNDC9Q8TBE3 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC14.19□□□□□ -0.14
FNDC9Q8TBE3 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
FNDC9Q8TBE3 LHFPL2-207ENST00000515007 4680 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
FNDC9Q8TBE3 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC14.19□□□□□ -0.14
FNDC9Q8TBE3 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC14.19□□□□□ -0.14
FNDC9Q8TBE3 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC14.19□□□□□ -0.14
FNDC9Q8TBE3 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC14.19□□□□□ -0.14
FNDC9Q8TBE3 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC14.19□□□□□ -0.14
FNDC9Q8TBE3 TIMM17BP1-201ENST00000545713 516 ntBASIC14.19□□□□□ -0.14
FNDC9Q8TBE3 CDK4-206ENST00000549606 558 ntTSL 2 BASIC14.19□□□□□ -0.14
FNDC9Q8TBE3 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC14.19□□□□□ -0.14
FNDC9Q8TBE3 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC14.19□□□□□ -0.14
FNDC9Q8TBE3 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
FNDC9Q8TBE3 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC14.19□□□□□ -0.14
FNDC9Q8TBE3 ARL16-202ENST00000570561 768 ntTSL 2 BASIC14.19□□□□□ -0.14
FNDC9Q8TBE3 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
FNDC9Q8TBE3 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
FNDC9Q8TBE3 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC14.19□□□□□ -0.14
FNDC9Q8TBE3 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
FNDC9Q8TBE3 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
FNDC9Q8TBE3 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
FNDC9Q8TBE3 CCAR2-201ENST00000308511 4853 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
FNDC9Q8TBE3 PAK2-201ENST00000327134 6139 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
FNDC9Q8TBE3 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC14.19□□□□□ -0.14
FNDC9Q8TBE3 BCL2L11-219ENST00000619294 5132 ntTSL 5 BASIC14.19□□□□□ -0.14
FNDC9Q8TBE3 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
FNDC9Q8TBE3 AL365203.3-201ENST00000609742 2057 ntBASIC14.19□□□□□ -0.14
FNDC9Q8TBE3 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
FNDC9Q8TBE3 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
FNDC9Q8TBE3 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
FNDC9Q8TBE3 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
FNDC9Q8TBE3 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
FNDC9Q8TBE3 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
FNDC9Q8TBE3 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC14.18□□□□□ -0.14
FNDC9Q8TBE3 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC14.18□□□□□ -0.14
FNDC9Q8TBE3 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
FNDC9Q8TBE3 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms