Protein–RNA interactions for Protein: Q8NHY2

RFWD2, E3 ubiquitin-protein ligase RFWD2, humanhuman

Predictions only

Length 731 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFWD2Q8NHY2 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
RFWD2Q8NHY2 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC15.62■□□□□ 0.09
RFWD2Q8NHY2 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC15.62■□□□□ 0.09
RFWD2Q8NHY2 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC15.62■□□□□ 0.09
RFWD2Q8NHY2 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC15.62■□□□□ 0.09
RFWD2Q8NHY2 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
RFWD2Q8NHY2 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC15.62■□□□□ 0.09
RFWD2Q8NHY2 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
RFWD2Q8NHY2 AC136632.2-201ENST00000512891 861 ntBASIC15.62■□□□□ 0.09
RFWD2Q8NHY2 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
RFWD2Q8NHY2 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC15.62■□□□□ 0.09
RFWD2Q8NHY2 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC15.62■□□□□ 0.09
RFWD2Q8NHY2 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
RFWD2Q8NHY2 AC148477.8-201ENST00000624298 468 ntBASIC15.62■□□□□ 0.09
RFWD2Q8NHY2 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC15.62■□□□□ 0.09
RFWD2Q8NHY2 PCDHA7-201ENST00000356878 2922 ntAPPRIS ALT2 BASIC15.62■□□□□ 0.09
RFWD2Q8NHY2 AMACR-203ENST00000382072 2919 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
RFWD2Q8NHY2 HTR3A-202ENST00000355556 2331 ntTSL 2 BASIC15.62■□□□□ 0.09
RFWD2Q8NHY2 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC15.62■□□□□ 0.09
RFWD2Q8NHY2 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
RFWD2Q8NHY2 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC15.62■□□□□ 0.09
RFWD2Q8NHY2 EIF4G1-212ENST00000424196 5653 ntTSL 2 BASIC15.62■□□□□ 0.09
RFWD2Q8NHY2 KCNC1-201ENST00000265969 4295 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
RFWD2Q8NHY2 ABCG1-201ENST00000343687 3037 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
RFWD2Q8NHY2 SCLY-202ENST00000409736 1774 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
RFWD2Q8NHY2 NMUR1-201ENST00000305141 3298 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
RFWD2Q8NHY2 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
RFWD2Q8NHY2 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC15.61■□□□□ 0.09
RFWD2Q8NHY2 RALGPS2-204ENST00000367635 5834 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
RFWD2Q8NHY2 BBS2-201ENST00000245157 2963 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
RFWD2Q8NHY2 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC15.61■□□□□ 0.09
RFWD2Q8NHY2 SEMA5B-206ENST00000451055 4579 ntAPPRIS ALT2 TSL 2 BASIC15.61■□□□□ 0.09
RFWD2Q8NHY2 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC15.61■□□□□ 0.09
RFWD2Q8NHY2 AC009053.1-204ENST00000429810 2355 ntTSL 2 BASIC15.61■□□□□ 0.09
RFWD2Q8NHY2 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC15.61■□□□□ 0.09
RFWD2Q8NHY2 KIAA0930-203ENST00000391627 2623 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
RFWD2Q8NHY2 ZNF516-201ENST00000443185 8118 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
RFWD2Q8NHY2 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
RFWD2Q8NHY2 MED22-202ENST00000371999 987 ntTSL 3 BASIC15.61■□□□□ 0.09
RFWD2Q8NHY2 INIP-202ENST00000374236 874 ntTSL 2 BASIC15.61■□□□□ 0.09
RFWD2Q8NHY2 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
RFWD2Q8NHY2 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC15.61■□□□□ 0.09
RFWD2Q8NHY2 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC15.61■□□□□ 0.09
RFWD2Q8NHY2 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
RFWD2Q8NHY2 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC15.61■□□□□ 0.09
RFWD2Q8NHY2 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC15.61■□□□□ 0.09
RFWD2Q8NHY2 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC15.61■□□□□ 0.09
RFWD2Q8NHY2 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC15.61■□□□□ 0.09
RFWD2Q8NHY2 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC15.61■□□□□ 0.09
RFWD2Q8NHY2 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
RFWD2Q8NHY2 EXOC6B-202ENST00000410104 5795 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
RFWD2Q8NHY2 ATP2B3-204ENST00000370186 6742 ntTSL 5 BASIC15.61■□□□□ 0.09
RFWD2Q8NHY2 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
RFWD2Q8NHY2 GLI2-203ENST00000361492 6768 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
RFWD2Q8NHY2 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC15.61■□□□□ 0.09
RFWD2Q8NHY2 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
RFWD2Q8NHY2 LIN9-201ENST00000328205 3567 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
RFWD2Q8NHY2 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
RFWD2Q8NHY2 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC15.61■□□□□ 0.09
RFWD2Q8NHY2 MYADM-205ENST00000391771 3111 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
RFWD2Q8NHY2 PPP1R13L-202ENST00000418234 3118 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
RFWD2Q8NHY2 AMT-204ENST00000427987 1646 ntTSL 5 BASIC15.61■□□□□ 0.09
RFWD2Q8NHY2 TTC28-AS1-207ENST00000428584 5859 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
RFWD2Q8NHY2 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
RFWD2Q8NHY2 MYO15B-237ENST00000642007 4893 ntBASIC15.61■□□□□ 0.09
RFWD2Q8NHY2 NAALADL1-204ENST00000358658 2699 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
RFWD2Q8NHY2 ZNF800-201ENST00000265827 4203 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
RFWD2Q8NHY2 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC15.6■□□□□ 0.09
RFWD2Q8NHY2 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC15.6■□□□□ 0.09
RFWD2Q8NHY2 SYT5-201ENST00000354308 3792 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
RFWD2Q8NHY2 SPAG9-222ENST00000618113 8246 ntAPPRIS ALT1 TSL 5 BASIC15.6■□□□□ 0.09
RFWD2Q8NHY2 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
RFWD2Q8NHY2 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC15.6■□□□□ 0.09
RFWD2Q8NHY2 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
RFWD2Q8NHY2 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
RFWD2Q8NHY2 TGIF2-202ENST00000373874 3432 ntAPPRIS P1 TSL 2 BASIC15.6■□□□□ 0.09
RFWD2Q8NHY2 CEP131-208ENST00000575907 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
RFWD2Q8NHY2 C15orf59-204ENST00000569673 6573 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
RFWD2Q8NHY2 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
RFWD2Q8NHY2 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
RFWD2Q8NHY2 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC15.6■□□□□ 0.09
RFWD2Q8NHY2 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC15.6■□□□□ 0.09
RFWD2Q8NHY2 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC15.6■□□□□ 0.09
RFWD2Q8NHY2 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC15.6■□□□□ 0.09
RFWD2Q8NHY2 KRT18P67-201ENST00000432816 1264 ntBASIC15.6■□□□□ 0.09
RFWD2Q8NHY2 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC15.6■□□□□ 0.09
RFWD2Q8NHY2 HNRNPDP1-201ENST00000439535 754 ntBASIC15.6■□□□□ 0.09
RFWD2Q8NHY2 FAAHP1-202ENST00000446499 1238 ntBASIC15.6■□□□□ 0.09
RFWD2Q8NHY2 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC15.6■□□□□ 0.09
RFWD2Q8NHY2 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC15.6■□□□□ 0.09
RFWD2Q8NHY2 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC15.6■□□□□ 0.09
RFWD2Q8NHY2 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC15.6■□□□□ 0.09
RFWD2Q8NHY2 CALM3-211ENST00000598871 561 ntTSL 4 BASIC15.6■□□□□ 0.09
RFWD2Q8NHY2 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC15.6■□□□□ 0.09
RFWD2Q8NHY2 MIR1199-201ENST00000621445 119 ntBASIC15.6■□□□□ 0.09
RFWD2Q8NHY2 C4A-259ENST00000498271 5269 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
RFWD2Q8NHY2 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
RFWD2Q8NHY2 AICDA-201ENST00000229335 2819 ntAPPRIS P2 TSL 1 (best) BASIC15.6■□□□□ 0.09
RFWD2Q8NHY2 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
RFWD2Q8NHY2 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 84.6 ms