Protein–RNA interactions for Protein: Q8N9L1

ZIC4, Zinc finger protein ZIC 4, humanhuman

Predictions only

Length 334 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC4Q8N9L1 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
ZIC4Q8N9L1 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
ZIC4Q8N9L1 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
ZIC4Q8N9L1 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
ZIC4Q8N9L1 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
ZIC4Q8N9L1 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
ZIC4Q8N9L1 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
ZIC4Q8N9L1 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC13.86□□□□□ -0.19
ZIC4Q8N9L1 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC13.86□□□□□ -0.19
ZIC4Q8N9L1 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC13.86□□□□□ -0.19
ZIC4Q8N9L1 MEP1AP4-201ENST00000423244 1087 ntBASIC13.86□□□□□ -0.19
ZIC4Q8N9L1 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
ZIC4Q8N9L1 RN7SL399P-201ENST00000471648 279 ntBASIC13.86□□□□□ -0.19
ZIC4Q8N9L1 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC13.86□□□□□ -0.19
ZIC4Q8N9L1 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC13.86□□□□□ -0.19
ZIC4Q8N9L1 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC13.86□□□□□ -0.19
ZIC4Q8N9L1 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC13.86□□□□□ -0.19
ZIC4Q8N9L1 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC13.86□□□□□ -0.19
ZIC4Q8N9L1 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC13.86□□□□□ -0.19
ZIC4Q8N9L1 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC13.86□□□□□ -0.19
ZIC4Q8N9L1 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
ZIC4Q8N9L1 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC13.86□□□□□ -0.19
ZIC4Q8N9L1 AC092364.2-202ENST00000597012 1073 ntBASIC13.86□□□□□ -0.19
ZIC4Q8N9L1 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC13.86□□□□□ -0.19
ZIC4Q8N9L1 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
ZIC4Q8N9L1 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
ZIC4Q8N9L1 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
ZIC4Q8N9L1 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
ZIC4Q8N9L1 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
ZIC4Q8N9L1 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
ZIC4Q8N9L1 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
ZIC4Q8N9L1 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
ZIC4Q8N9L1 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
ZIC4Q8N9L1 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
ZIC4Q8N9L1 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
ZIC4Q8N9L1 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
ZIC4Q8N9L1 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
ZIC4Q8N9L1 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
ZIC4Q8N9L1 AC007541.1-201ENST00000570282 1469 ntBASIC13.86□□□□□ -0.19
ZIC4Q8N9L1 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
ZIC4Q8N9L1 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC13.86□□□□□ -0.19
ZIC4Q8N9L1 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
ZIC4Q8N9L1 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
ZIC4Q8N9L1 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
ZIC4Q8N9L1 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
ZIC4Q8N9L1 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
ZIC4Q8N9L1 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
ZIC4Q8N9L1 AC092384.3-202ENST00000564646 2873 ntBASIC13.85□□□□□ -0.19
ZIC4Q8N9L1 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
ZIC4Q8N9L1 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
ZIC4Q8N9L1 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
ZIC4Q8N9L1 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC13.85□□□□□ -0.19
ZIC4Q8N9L1 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC13.85□□□□□ -0.19
ZIC4Q8N9L1 POLL-217ENST00000628479 1953 ntTSL 5 BASIC13.85□□□□□ -0.19
ZIC4Q8N9L1 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
ZIC4Q8N9L1 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC13.85□□□□□ -0.19
ZIC4Q8N9L1 MBP-202ENST00000355994 2772 ntTSL 5 BASIC13.85□□□□□ -0.19
ZIC4Q8N9L1 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
ZIC4Q8N9L1 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC13.85□□□□□ -0.19
ZIC4Q8N9L1 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC13.85□□□□□ -0.19
ZIC4Q8N9L1 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
ZIC4Q8N9L1 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
ZIC4Q8N9L1 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
ZIC4Q8N9L1 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC13.85□□□□□ -0.19
ZIC4Q8N9L1 AC013268.4-201ENST00000637413 2228 ntBASIC13.85□□□□□ -0.19
ZIC4Q8N9L1 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
ZIC4Q8N9L1 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
ZIC4Q8N9L1 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
ZIC4Q8N9L1 GOLGA6L11P-201ENST00000417252 1298 ntBASIC13.85□□□□□ -0.19
ZIC4Q8N9L1 DFFBP1-201ENST00000433250 979 ntBASIC13.85□□□□□ -0.19
ZIC4Q8N9L1 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC13.85□□□□□ -0.19
ZIC4Q8N9L1 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
ZIC4Q8N9L1 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC13.85□□□□□ -0.19
ZIC4Q8N9L1 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC13.85□□□□□ -0.19
ZIC4Q8N9L1 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC13.85□□□□□ -0.19
ZIC4Q8N9L1 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC13.85□□□□□ -0.19
ZIC4Q8N9L1 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC13.85□□□□□ -0.19
ZIC4Q8N9L1 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC13.85□□□□□ -0.19
ZIC4Q8N9L1 GPX4-206ENST00000588919 803 ntTSL 2 BASIC13.85□□□□□ -0.19
ZIC4Q8N9L1 YTHDF3-AS1-201ENST00000603538 718 ntBASIC13.85□□□□□ -0.19
ZIC4Q8N9L1 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC13.85□□□□□ -0.19
ZIC4Q8N9L1 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
ZIC4Q8N9L1 AC004233.3-201ENST00000607794 1269 ntBASIC13.85□□□□□ -0.19
ZIC4Q8N9L1 AC099568.2-201ENST00000609194 695 ntBASIC13.85□□□□□ -0.19
ZIC4Q8N9L1 MIR8072-201ENST00000614241 80 ntBASIC13.85□□□□□ -0.19
ZIC4Q8N9L1 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC13.85□□□□□ -0.19
ZIC4Q8N9L1 HADH-212ENST00000638621 741 ntTSL 5 BASIC13.85□□□□□ -0.19
ZIC4Q8N9L1 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
ZIC4Q8N9L1 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
ZIC4Q8N9L1 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC13.85□□□□□ -0.19
ZIC4Q8N9L1 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
ZIC4Q8N9L1 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
ZIC4Q8N9L1 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
ZIC4Q8N9L1 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC13.85□□□□□ -0.19
ZIC4Q8N9L1 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
ZIC4Q8N9L1 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC13.85□□□□□ -0.19
ZIC4Q8N9L1 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
ZIC4Q8N9L1 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC13.85□□□□□ -0.19
ZIC4Q8N9L1 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
ZIC4Q8N9L1 AC073347.1-201ENST00000421633 2643 ntBASIC13.85□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 70.1 ms