Protein–RNA interactions for Protein: Q8IWF9

CCDC83, Coiled-coil domain-containing protein 83, humanhuman

Predictions only

Length 413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC83Q8IWF9 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC18.49■□□□□ 0.55
CCDC83Q8IWF9 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
CCDC83Q8IWF9 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
CCDC83Q8IWF9 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC18.49■□□□□ 0.55
CCDC83Q8IWF9 ZNF687-201ENST00000324048 5378 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CCDC83Q8IWF9 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CCDC83Q8IWF9 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
CCDC83Q8IWF9 FKBP5-201ENST00000357266 3772 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CCDC83Q8IWF9 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
CCDC83Q8IWF9 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CCDC83Q8IWF9 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC18.49■□□□□ 0.55
CCDC83Q8IWF9 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CCDC83Q8IWF9 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CCDC83Q8IWF9 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CCDC83Q8IWF9 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC18.49■□□□□ 0.55
CCDC83Q8IWF9 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC18.49■□□□□ 0.55
CCDC83Q8IWF9 COA5-202ENST00000409997 557 ntTSL 4 BASIC18.49■□□□□ 0.55
CCDC83Q8IWF9 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC18.49■□□□□ 0.55
CCDC83Q8IWF9 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CCDC83Q8IWF9 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC18.49■□□□□ 0.55
CCDC83Q8IWF9 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC18.49■□□□□ 0.55
CCDC83Q8IWF9 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC18.49■□□□□ 0.55
CCDC83Q8IWF9 AP000344.2-201ENST00000512987 629 ntBASIC18.49■□□□□ 0.55
CCDC83Q8IWF9 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CCDC83Q8IWF9 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC18.49■□□□□ 0.55
CCDC83Q8IWF9 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
CCDC83Q8IWF9 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC18.49■□□□□ 0.55
CCDC83Q8IWF9 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CCDC83Q8IWF9 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CCDC83Q8IWF9 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CCDC83Q8IWF9 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CCDC83Q8IWF9 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC18.49■□□□□ 0.55
CCDC83Q8IWF9 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CCDC83Q8IWF9 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
CCDC83Q8IWF9 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CCDC83Q8IWF9 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC18.49■□□□□ 0.55
CCDC83Q8IWF9 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
CCDC83Q8IWF9 STRN-202ENST00000379213 2254 ntTSL 5 BASIC18.49■□□□□ 0.55
CCDC83Q8IWF9 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CCDC83Q8IWF9 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CCDC83Q8IWF9 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CCDC83Q8IWF9 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC18.49■□□□□ 0.55
CCDC83Q8IWF9 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
CCDC83Q8IWF9 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC18.49■□□□□ 0.55
CCDC83Q8IWF9 GRN-214ENST00000589265 1632 ntTSL 5 BASIC18.49■□□□□ 0.55
CCDC83Q8IWF9 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC18.49■□□□□ 0.55
CCDC83Q8IWF9 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
CCDC83Q8IWF9 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC18.48■□□□□ 0.55
CCDC83Q8IWF9 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
CCDC83Q8IWF9 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CCDC83Q8IWF9 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC18.48■□□□□ 0.55
CCDC83Q8IWF9 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
CCDC83Q8IWF9 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CCDC83Q8IWF9 LINC00528-201ENST00000600723 2160 ntBASIC18.48■□□□□ 0.55
CCDC83Q8IWF9 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC18.48■□□□□ 0.55
CCDC83Q8IWF9 MAP1S-201ENST00000324096 3419 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
CCDC83Q8IWF9 TTC22-202ENST00000371276 3345 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
CCDC83Q8IWF9 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
CCDC83Q8IWF9 FGFR1OP2-201ENST00000229395 2924 ntTSL 2 BASIC18.48■□□□□ 0.55
CCDC83Q8IWF9 DIDO1-201ENST00000266070 8574 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
CCDC83Q8IWF9 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CCDC83Q8IWF9 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
CCDC83Q8IWF9 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC18.48■□□□□ 0.55
CCDC83Q8IWF9 VTN-201ENST00000226218 2149 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CCDC83Q8IWF9 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CCDC83Q8IWF9 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
CCDC83Q8IWF9 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CCDC83Q8IWF9 BX842568.4-201ENST00000421222 227 ntBASIC18.48■□□□□ 0.55
CCDC83Q8IWF9 MTND6P24-201ENST00000440466 518 ntBASIC18.48■□□□□ 0.55
CCDC83Q8IWF9 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
CCDC83Q8IWF9 LITAF-210ENST00000571976 548 ntTSL 2 BASIC18.48■□□□□ 0.55
CCDC83Q8IWF9 LITAF-214ENST00000574703 486 ntTSL 2 BASIC18.48■□□□□ 0.55
CCDC83Q8IWF9 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC18.48■□□□□ 0.55
CCDC83Q8IWF9 AC004835.2-201ENST00000603762 682 ntBASIC18.48■□□□□ 0.55
CCDC83Q8IWF9 RN7SL828P-201ENST00000607615 303 ntBASIC18.48■□□□□ 0.55
CCDC83Q8IWF9 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CCDC83Q8IWF9 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
CCDC83Q8IWF9 EHHADH-203ENST00000456310 2577 ntTSL 2 BASIC18.48■□□□□ 0.55
CCDC83Q8IWF9 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CCDC83Q8IWF9 AC068587.6-202ENST00000641839 5619 ntBASIC18.48■□□□□ 0.55
CCDC83Q8IWF9 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
CCDC83Q8IWF9 SIK1-201ENST00000270162 4712 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CCDC83Q8IWF9 CU639417.2-201ENST00000613488 4705 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CCDC83Q8IWF9 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CCDC83Q8IWF9 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CCDC83Q8IWF9 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
CCDC83Q8IWF9 PDP1-201ENST00000297598 4272 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
CCDC83Q8IWF9 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
CCDC83Q8IWF9 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC18.47■□□□□ 0.55
CCDC83Q8IWF9 COMP-203ENST00000542601 2707 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CCDC83Q8IWF9 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CCDC83Q8IWF9 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
CCDC83Q8IWF9 AC106881.1-201ENST00000605849 3329 ntBASIC18.47■□□□□ 0.55
CCDC83Q8IWF9 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CCDC83Q8IWF9 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC18.47■□□□□ 0.55
CCDC83Q8IWF9 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC18.47■□□□□ 0.55
CCDC83Q8IWF9 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
CCDC83Q8IWF9 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC18.47■□□□□ 0.55
CCDC83Q8IWF9 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC18.47■□□□□ 0.55
CCDC83Q8IWF9 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC18.47■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 51.6 ms