Protein–RNA interactions for Protein: Q8HWS3

RFX6, DNA-binding protein RFX6, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX6Q8HWS3 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC16.39■□□□□ 0.22
RFX6Q8HWS3 BPTF-202ENST00000321892 11292 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.22
RFX6Q8HWS3 PDP1-201ENST00000297598 4272 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.22
RFX6Q8HWS3 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC16.39■□□□□ 0.22
RFX6Q8HWS3 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
RFX6Q8HWS3 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
RFX6Q8HWS3 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
RFX6Q8HWS3 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC16.39■□□□□ 0.21
RFX6Q8HWS3 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
RFX6Q8HWS3 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC16.39■□□□□ 0.21
RFX6Q8HWS3 ZFPM2-201ENST00000407775 4700 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
RFX6Q8HWS3 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC16.39■□□□□ 0.21
RFX6Q8HWS3 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC16.39■□□□□ 0.21
RFX6Q8HWS3 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
RFX6Q8HWS3 ANOS1-201ENST00000262648 6314 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
RFX6Q8HWS3 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
RFX6Q8HWS3 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
RFX6Q8HWS3 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC16.39■□□□□ 0.21
RFX6Q8HWS3 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
RFX6Q8HWS3 RPL30-202ENST00000396070 440 ntTSL 2 BASIC16.39■□□□□ 0.21
RFX6Q8HWS3 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
RFX6Q8HWS3 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
RFX6Q8HWS3 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC16.39■□□□□ 0.21
RFX6Q8HWS3 NME4-207ENST00000450036 985 ntTSL 3 BASIC16.39■□□□□ 0.21
RFX6Q8HWS3 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
RFX6Q8HWS3 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
RFX6Q8HWS3 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC16.39■□□□□ 0.21
RFX6Q8HWS3 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC16.39■□□□□ 0.21
RFX6Q8HWS3 SUOX-214ENST00000551841 906 ntTSL 3 BASIC16.39■□□□□ 0.21
RFX6Q8HWS3 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
RFX6Q8HWS3 AC007967.4-201ENST00000614700 386 ntBASIC16.39■□□□□ 0.21
RFX6Q8HWS3 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
RFX6Q8HWS3 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
RFX6Q8HWS3 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
RFX6Q8HWS3 IMPDH1P4-201ENST00000445028 1534 ntBASIC16.39■□□□□ 0.21
RFX6Q8HWS3 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC16.39■□□□□ 0.21
RFX6Q8HWS3 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC16.39■□□□□ 0.21
RFX6Q8HWS3 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
RFX6Q8HWS3 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
RFX6Q8HWS3 WIZ-207ENST00000599910 4609 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
RFX6Q8HWS3 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC16.38■□□□□ 0.21
RFX6Q8HWS3 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC16.38■□□□□ 0.21
RFX6Q8HWS3 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC16.38■□□□□ 0.21
RFX6Q8HWS3 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
RFX6Q8HWS3 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC16.38■□□□□ 0.21
RFX6Q8HWS3 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
RFX6Q8HWS3 GRIN3A-201ENST00000361820 7770 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
RFX6Q8HWS3 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
RFX6Q8HWS3 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
RFX6Q8HWS3 CTXND1-201ENST00000560778 6890 ntAPPRIS P1 TSL 3 BASIC16.38■□□□□ 0.21
RFX6Q8HWS3 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC16.38■□□□□ 0.21
RFX6Q8HWS3 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
RFX6Q8HWS3 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC16.38■□□□□ 0.21
RFX6Q8HWS3 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
RFX6Q8HWS3 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC16.38■□□□□ 0.21
RFX6Q8HWS3 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC16.38■□□□□ 0.21
RFX6Q8HWS3 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC16.38■□□□□ 0.21
RFX6Q8HWS3 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
RFX6Q8HWS3 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC16.38■□□□□ 0.21
RFX6Q8HWS3 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC16.38■□□□□ 0.21
RFX6Q8HWS3 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC16.38■□□□□ 0.21
RFX6Q8HWS3 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC16.38■□□□□ 0.21
RFX6Q8HWS3 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
RFX6Q8HWS3 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
RFX6Q8HWS3 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC16.38■□□□□ 0.21
RFX6Q8HWS3 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC16.38■□□□□ 0.21
RFX6Q8HWS3 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC16.38■□□□□ 0.21
RFX6Q8HWS3 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC16.38■□□□□ 0.21
RFX6Q8HWS3 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
RFX6Q8HWS3 AC022400.6-201ENST00000603027 5818 ntAPPRIS P5 TSL 2 BASIC16.38■□□□□ 0.21
RFX6Q8HWS3 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
RFX6Q8HWS3 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
RFX6Q8HWS3 ADAMTS15-201ENST00000299164 5673 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
RFX6Q8HWS3 MAST1-201ENST00000251472 4833 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
RFX6Q8HWS3 PARD3B-204ENST00000406610 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
RFX6Q8HWS3 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
RFX6Q8HWS3 MYH6-201ENST00000356287 5871 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
RFX6Q8HWS3 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC16.38■□□□□ 0.21
RFX6Q8HWS3 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
RFX6Q8HWS3 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC16.38■□□□□ 0.21
RFX6Q8HWS3 GOLGA6L17P-202ENST00000614358 1398 ntBASIC16.38■□□□□ 0.21
RFX6Q8HWS3 FOSL2-201ENST00000264716 6708 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
RFX6Q8HWS3 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
RFX6Q8HWS3 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
RFX6Q8HWS3 MYO15B-237ENST00000642007 4893 ntBASIC16.37■□□□□ 0.21
RFX6Q8HWS3 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
RFX6Q8HWS3 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
RFX6Q8HWS3 SAP130-201ENST00000259234 4140 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
RFX6Q8HWS3 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
RFX6Q8HWS3 KLHL26-201ENST00000300976 4407 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
RFX6Q8HWS3 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
RFX6Q8HWS3 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC16.37■□□□□ 0.21
RFX6Q8HWS3 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
RFX6Q8HWS3 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
RFX6Q8HWS3 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
RFX6Q8HWS3 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
RFX6Q8HWS3 RAI14-202ENST00000428746 5064 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
RFX6Q8HWS3 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
RFX6Q8HWS3 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
RFX6Q8HWS3 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 47.7 ms