Protein–RNA interactions for Protein: Q86VV8

RTTN, Rotatin, humanhuman

Predictions only

Length 2,226 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTTNQ86VV8 KIF1A-201ENST00000320389 8832 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
RTTNQ86VV8 SPEG-205ENST00000396698 3379 ntTSL 5 BASIC13.96□□□□□ -0.17
RTTNQ86VV8 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
RTTNQ86VV8 FAM219B-201ENST00000357635 3550 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
RTTNQ86VV8 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
RTTNQ86VV8 ZNF219-203ENST00000451119 2918 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
RTTNQ86VV8 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
RTTNQ86VV8 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC13.96□□□□□ -0.17
RTTNQ86VV8 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
RTTNQ86VV8 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
RTTNQ86VV8 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
RTTNQ86VV8 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
RTTNQ86VV8 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
RTTNQ86VV8 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC13.96□□□□□ -0.17
RTTNQ86VV8 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
RTTNQ86VV8 AC125807.1-201ENST00000483097 614 ntBASIC13.96□□□□□ -0.17
RTTNQ86VV8 FAM8A2P-201ENST00000528813 1142 ntBASIC13.96□□□□□ -0.17
RTTNQ86VV8 BAD-207ENST00000544785 525 ntTSL 3 BASIC13.96□□□□□ -0.17
RTTNQ86VV8 SUOX-214ENST00000551841 906 ntTSL 3 BASIC13.96□□□□□ -0.17
RTTNQ86VV8 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
RTTNQ86VV8 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC13.96□□□□□ -0.17
RTTNQ86VV8 AC003101.2-201ENST00000612557 442 ntBASIC13.96□□□□□ -0.17
RTTNQ86VV8 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC13.96□□□□□ -0.17
RTTNQ86VV8 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
RTTNQ86VV8 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
RTTNQ86VV8 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
RTTNQ86VV8 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
RTTNQ86VV8 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
RTTNQ86VV8 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
RTTNQ86VV8 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.18
RTTNQ86VV8 E2F6-212ENST00000546212 3191 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
RTTNQ86VV8 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
RTTNQ86VV8 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC13.96□□□□□ -0.18
RTTNQ86VV8 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC13.96□□□□□ -0.18
RTTNQ86VV8 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC13.96□□□□□ -0.18
RTTNQ86VV8 AC090616.6-203ENST00000579186 1945 ntBASIC13.96□□□□□ -0.18
RTTNQ86VV8 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.18
RTTNQ86VV8 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC13.96□□□□□ -0.18
RTTNQ86VV8 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
RTTNQ86VV8 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC13.96□□□□□ -0.18
RTTNQ86VV8 GRM5-205ENST00000455756 7927 ntAPPRIS P3 TSL 2 BASIC13.96□□□□□ -0.18
RTTNQ86VV8 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
RTTNQ86VV8 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC13.95□□□□□ -0.18
RTTNQ86VV8 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
RTTNQ86VV8 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
RTTNQ86VV8 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
RTTNQ86VV8 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC13.95□□□□□ -0.18
RTTNQ86VV8 AC020915.1-202ENST00000427361 922 ntAPPRIS ALT2 TSL 2 BASIC13.95□□□□□ -0.18
RTTNQ86VV8 AL353705.2-201ENST00000428243 662 ntBASIC13.95□□□□□ -0.18
RTTNQ86VV8 KLF2P3-201ENST00000451977 1087 ntBASIC13.95□□□□□ -0.18
RTTNQ86VV8 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC13.95□□□□□ -0.18
RTTNQ86VV8 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC13.95□□□□□ -0.18
RTTNQ86VV8 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC13.95□□□□□ -0.18
RTTNQ86VV8 IGHV3-62-201ENST00000520057 340 ntBASIC13.95□□□□□ -0.18
RTTNQ86VV8 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC13.95□□□□□ -0.18
RTTNQ86VV8 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC13.95□□□□□ -0.18
RTTNQ86VV8 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
RTTNQ86VV8 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC13.95□□□□□ -0.18
RTTNQ86VV8 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
RTTNQ86VV8 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
RTTNQ86VV8 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC13.95□□□□□ -0.18
RTTNQ86VV8 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC13.95□□□□□ -0.18
RTTNQ86VV8 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC13.95□□□□□ -0.18
RTTNQ86VV8 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
RTTNQ86VV8 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
RTTNQ86VV8 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC13.95□□□□□ -0.18
RTTNQ86VV8 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
RTTNQ86VV8 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
RTTNQ86VV8 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC13.95□□□□□ -0.18
RTTNQ86VV8 SPDYE7P-202ENST00000420373 878 ntBASIC13.95□□□□□ -0.18
RTTNQ86VV8 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC13.95□□□□□ -0.18
RTTNQ86VV8 UBE3A-224ENST00000635914 9352 ntTSL 5 BASIC13.95□□□□□ -0.18
RTTNQ86VV8 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
RTTNQ86VV8 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
RTTNQ86VV8 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
RTTNQ86VV8 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
RTTNQ86VV8 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC13.95□□□□□ -0.18
RTTNQ86VV8 CA10-203ENST00000451037 3189 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
RTTNQ86VV8 PTPN9-201ENST00000306726 3862 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
RTTNQ86VV8 EXT1-201ENST00000378204 8270 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
RTTNQ86VV8 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
RTTNQ86VV8 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
RTTNQ86VV8 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
RTTNQ86VV8 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
RTTNQ86VV8 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
RTTNQ86VV8 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
RTTNQ86VV8 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
RTTNQ86VV8 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
RTTNQ86VV8 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
RTTNQ86VV8 VWA5B2-202ENST00000426955 4120 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
RTTNQ86VV8 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC13.94□□□□□ -0.18
RTTNQ86VV8 AMT-233ENST00000636522 1620 ntTSL 2 BASIC13.94□□□□□ -0.18
RTTNQ86VV8 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
RTTNQ86VV8 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
RTTNQ86VV8 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC13.94□□□□□ -0.18
RTTNQ86VV8 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC13.94□□□□□ -0.18
RTTNQ86VV8 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC13.94□□□□□ -0.18
RTTNQ86VV8 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
RTTNQ86VV8 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC13.94□□□□□ -0.18
RTTNQ86VV8 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC13.94□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 54.7 ms