Protein–RNA interactions for Protein: Q7LBC6

KDM3B, Lysine-specific demethylase 3B, humanhuman

Predictions only

Length 1,761 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3BQ7LBC6 ATG10-203ENST00000458350 1795 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
KDM3BQ7LBC6 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
KDM3BQ7LBC6 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
KDM3BQ7LBC6 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC19.63■□□□□ 0.73
KDM3BQ7LBC6 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
KDM3BQ7LBC6 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
KDM3BQ7LBC6 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
KDM3BQ7LBC6 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
KDM3BQ7LBC6 TPM2-202ENST00000360958 1189 ntAPPRIS P5 TSL 1 (best) BASIC19.62■□□□□ 0.73
KDM3BQ7LBC6 TCEAL1-203ENST00000372626 721 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
KDM3BQ7LBC6 GTF2A2-204ENST00000396063 970 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
KDM3BQ7LBC6 AL162457.2-202ENST00000442888 679 ntTSL 5 BASIC19.62■□□□□ 0.73
KDM3BQ7LBC6 CD63-208ENST00000549117 1233 ntAPPRIS P1 TSL 3 BASIC19.62■□□□□ 0.73
KDM3BQ7LBC6 AC123786.1-201ENST00000581626 661 ntTSL 3 BASIC19.62■□□□□ 0.73
KDM3BQ7LBC6 AL096828.3-201ENST00000615354 462 ntBASIC19.62■□□□□ 0.73
KDM3BQ7LBC6 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
KDM3BQ7LBC6 FANCA-213ENST00000563673 1694 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
KDM3BQ7LBC6 TEX264-205ENST00000416589 1313 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
KDM3BQ7LBC6 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC19.62■□□□□ 0.73
KDM3BQ7LBC6 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
KDM3BQ7LBC6 SNAP47-203ENST00000366760 1446 ntAPPRIS ALT2 TSL 2 BASIC19.62■□□□□ 0.73
KDM3BQ7LBC6 STRN-202ENST00000379213 2254 ntTSL 5 BASIC19.62■□□□□ 0.73
KDM3BQ7LBC6 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
KDM3BQ7LBC6 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
KDM3BQ7LBC6 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC19.62■□□□□ 0.73
KDM3BQ7LBC6 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
KDM3BQ7LBC6 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
KDM3BQ7LBC6 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC19.62■□□□□ 0.73
KDM3BQ7LBC6 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
KDM3BQ7LBC6 PRTFDC1-203ENST00000376378 747 ntTSL 2 BASIC19.62■□□□□ 0.73
KDM3BQ7LBC6 AC004945.1-201ENST00000416738 983 ntBASIC19.62■□□□□ 0.73
KDM3BQ7LBC6 PRKG1-AS1-201ENST00000420193 971 ntTSL 3 BASIC19.62■□□□□ 0.73
KDM3BQ7LBC6 AC053503.1-201ENST00000429882 519 ntTSL 3 BASIC19.62■□□□□ 0.73
KDM3BQ7LBC6 IQCF3-203ENST00000444293 450 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
KDM3BQ7LBC6 VGLL4-214ENST00000451674 938 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
KDM3BQ7LBC6 RPSAP36-202ENST00000494591 1261 ntBASIC19.62■□□□□ 0.73
KDM3BQ7LBC6 C1RL-212ENST00000545337 813 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
KDM3BQ7LBC6 NIP7-208ENST00000569637 1099 ntTSL 2 BASIC19.62■□□□□ 0.73
KDM3BQ7LBC6 AC138466.3-201ENST00000619983 221 ntBASIC19.62■□□□□ 0.73
KDM3BQ7LBC6 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
KDM3BQ7LBC6 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC19.62■□□□□ 0.73
KDM3BQ7LBC6 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
KDM3BQ7LBC6 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC19.62■□□□□ 0.73
KDM3BQ7LBC6 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
KDM3BQ7LBC6 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC19.62■□□□□ 0.73
KDM3BQ7LBC6 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC19.61■□□□□ 0.73
KDM3BQ7LBC6 ANKRD33-202ENST00000340970 1507 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
KDM3BQ7LBC6 AC079328.2-201ENST00000561241 3354 ntBASIC19.61■□□□□ 0.73
KDM3BQ7LBC6 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
KDM3BQ7LBC6 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC19.61■□□□□ 0.73
KDM3BQ7LBC6 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
KDM3BQ7LBC6 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
KDM3BQ7LBC6 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
KDM3BQ7LBC6 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC19.61■□□□□ 0.73
KDM3BQ7LBC6 NEU2-201ENST00000233840 1143 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
KDM3BQ7LBC6 FZR1-201ENST00000313639 1215 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
KDM3BQ7LBC6 NOSIP-201ENST00000339093 1000 ntAPPRIS ALT1 TSL 5 BASIC19.61■□□□□ 0.73
KDM3BQ7LBC6 Z93015.1-201ENST00000451718 390 ntBASIC19.61■□□□□ 0.73
KDM3BQ7LBC6 AC110285.3-201ENST00000574472 665 ntTSL 3 BASIC19.61■□□□□ 0.73
KDM3BQ7LBC6 MIR4783-201ENST00000580343 82 ntBASIC19.61■□□□□ 0.73
KDM3BQ7LBC6 SLC35G4-201ENST00000588001 1017 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
KDM3BQ7LBC6 TNNT1-212ENST00000588981 1163 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
KDM3BQ7LBC6 AL109910.1-201ENST00000452071 1330 ntTSL 2 BASIC19.61■□□□□ 0.73
KDM3BQ7LBC6 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
KDM3BQ7LBC6 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
KDM3BQ7LBC6 LEF1-216ENST00000510624 1472 ntTSL 2 BASIC19.61■□□□□ 0.73
KDM3BQ7LBC6 C18orf15-201ENST00000623680 2534 ntBASIC19.61■□□□□ 0.73
KDM3BQ7LBC6 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
KDM3BQ7LBC6 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC19.61■□□□□ 0.73
KDM3BQ7LBC6 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
KDM3BQ7LBC6 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
KDM3BQ7LBC6 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
KDM3BQ7LBC6 AP000845.1-201ENST00000581677 2131 ntBASIC19.61■□□□□ 0.73
KDM3BQ7LBC6 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
KDM3BQ7LBC6 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
KDM3BQ7LBC6 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC19.6■□□□□ 0.73
KDM3BQ7LBC6 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
KDM3BQ7LBC6 CLRN1-203ENST00000328863 738 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
KDM3BQ7LBC6 RHOC-206ENST00000369637 888 ntAPPRIS P1 TSL 3 BASIC19.6■□□□□ 0.73
KDM3BQ7LBC6 ITPA-201ENST00000380113 1185 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
KDM3BQ7LBC6 ITPA-202ENST00000399838 897 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
KDM3BQ7LBC6 LIMS4-201ENST00000413601 1215 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
KDM3BQ7LBC6 AL354877.1-201ENST00000424412 413 ntBASIC19.6■□□□□ 0.73
KDM3BQ7LBC6 HOMER2P2-201ENST00000451621 847 ntBASIC19.6■□□□□ 0.73
KDM3BQ7LBC6 CD74-212ENST00000524315 584 ntTSL 5 BASIC19.6■□□□□ 0.73
KDM3BQ7LBC6 AGER-214ENST00000538695 487 ntTSL 2 BASIC19.6■□□□□ 0.73
KDM3BQ7LBC6 GLIS2-AS1-201ENST00000576080 340 ntTSL 2 BASIC19.6■□□□□ 0.73
KDM3BQ7LBC6 RN7SL219P-201ENST00000582872 296 ntBASIC19.6■□□□□ 0.73
KDM3BQ7LBC6 TUBB6-210ENST00000590967 430 ntTSL 3 BASIC19.6■□□□□ 0.73
KDM3BQ7LBC6 AC008750.3-201ENST00000601148 437 ntTSL 5 BASIC19.6■□□□□ 0.73
KDM3BQ7LBC6 ZACNP1-201ENST00000612259 710 ntBASIC19.6■□□□□ 0.73
KDM3BQ7LBC6 AGER-215ENST00000620802 737 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
KDM3BQ7LBC6 AHCYP2-201ENST00000430630 1300 ntBASIC19.6■□□□□ 0.73
KDM3BQ7LBC6 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
KDM3BQ7LBC6 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
KDM3BQ7LBC6 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
KDM3BQ7LBC6 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
KDM3BQ7LBC6 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
KDM3BQ7LBC6 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC19.6■□□□□ 0.73
KDM3BQ7LBC6 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC19.6■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms