Protein–RNA interactions for Protein: Q6P4E1

CASC4, Protein CASC4, humanhuman

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4Q6P4E1 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC16.11■□□□□ 0.17
CASC4Q6P4E1 MTDHP5-201ENST00000598980 586 ntBASIC16.11■□□□□ 0.17
CASC4Q6P4E1 AC026979.3-201ENST00000607315 403 ntBASIC16.11■□□□□ 0.17
CASC4Q6P4E1 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC16.11■□□□□ 0.17
CASC4Q6P4E1 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC16.11■□□□□ 0.17
CASC4Q6P4E1 TMEM181-201ENST00000367090 5390 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CASC4Q6P4E1 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC16.11■□□□□ 0.17
CASC4Q6P4E1 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CASC4Q6P4E1 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC16.11■□□□□ 0.17
CASC4Q6P4E1 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
CASC4Q6P4E1 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC16.11■□□□□ 0.17
CASC4Q6P4E1 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CASC4Q6P4E1 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CASC4Q6P4E1 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
CASC4Q6P4E1 UBR2-201ENST00000372899 7857 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
CASC4Q6P4E1 UBR2-202ENST00000372901 7857 ntAPPRIS ALT1 TSL 5 BASIC16.11■□□□□ 0.17
CASC4Q6P4E1 KHNYN-201ENST00000251343 6725 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CASC4Q6P4E1 OSBPL3-201ENST00000313367 6760 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CASC4Q6P4E1 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC16.11■□□□□ 0.17
CASC4Q6P4E1 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CASC4Q6P4E1 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CASC4Q6P4E1 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CASC4Q6P4E1 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CASC4Q6P4E1 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CASC4Q6P4E1 MCL1-202ENST00000369026 3932 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CASC4Q6P4E1 LPAR1-203ENST00000374431 3637 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
CASC4Q6P4E1 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC16.11■□□□□ 0.17
CASC4Q6P4E1 TNRC18P2-201ENST00000417666 2714 ntBASIC16.1■□□□□ 0.17
CASC4Q6P4E1 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
CASC4Q6P4E1 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CASC4Q6P4E1 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CASC4Q6P4E1 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CASC4Q6P4E1 SEPT8-206ENST00000378706 4168 ntAPPRIS ALT1 TSL 5 BASIC16.1■□□□□ 0.17
CASC4Q6P4E1 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
CASC4Q6P4E1 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CASC4Q6P4E1 CYP4F24P-201ENST00000586049 1580 ntBASIC16.1■□□□□ 0.17
CASC4Q6P4E1 SRSF8-201ENST00000587424 4028 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
CASC4Q6P4E1 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
CASC4Q6P4E1 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
CASC4Q6P4E1 LRP8-201ENST00000306052 7648 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
CASC4Q6P4E1 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
CASC4Q6P4E1 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
CASC4Q6P4E1 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC16.1■□□□□ 0.17
CASC4Q6P4E1 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
CASC4Q6P4E1 ELP1-201ENST00000374647 5905 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CASC4Q6P4E1 FBXL19-202ENST00000380310 3796 ntAPPRIS P2 TSL 2 BASIC16.1■□□□□ 0.17
CASC4Q6P4E1 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC16.1■□□□□ 0.17
CASC4Q6P4E1 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CASC4Q6P4E1 MIR574-201ENST00000385209 96 ntBASIC16.1■□□□□ 0.17
CASC4Q6P4E1 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CASC4Q6P4E1 PMP22-202ENST00000395936 816 ntTSL 3 BASIC16.1■□□□□ 0.17
CASC4Q6P4E1 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CASC4Q6P4E1 IMP4-203ENST00000409935 958 ntTSL 5 BASIC16.1■□□□□ 0.17
CASC4Q6P4E1 AC004832.2-201ENST00000426397 482 ntBASIC16.1■□□□□ 0.17
CASC4Q6P4E1 ELP6-209ENST00000446787 894 ntTSL 3 BASIC16.1■□□□□ 0.17
CASC4Q6P4E1 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC16.1■□□□□ 0.17
CASC4Q6P4E1 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC16.1■□□□□ 0.17
CASC4Q6P4E1 MAX-210ENST00000555419 765 ntTSL 5 BASIC16.1■□□□□ 0.17
CASC4Q6P4E1 LINC01225-203ENST00000563550 1244 ntBASIC16.1■□□□□ 0.17
CASC4Q6P4E1 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC16.1■□□□□ 0.17
CASC4Q6P4E1 MIR4313-201ENST00000580760 101 ntBASIC16.1■□□□□ 0.17
CASC4Q6P4E1 AL450472.2-201ENST00000603663 1156 ntBASIC16.1■□□□□ 0.17
CASC4Q6P4E1 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC16.1■□□□□ 0.17
CASC4Q6P4E1 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC16.1■□□□□ 0.17
CASC4Q6P4E1 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC16.1■□□□□ 0.17
CASC4Q6P4E1 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC16.1■□□□□ 0.17
CASC4Q6P4E1 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CASC4Q6P4E1 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC16.1■□□□□ 0.17
CASC4Q6P4E1 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC16.1■□□□□ 0.17
CASC4Q6P4E1 TTC22-202ENST00000371276 3345 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
CASC4Q6P4E1 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC16.1■□□□□ 0.17
CASC4Q6P4E1 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CASC4Q6P4E1 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
CASC4Q6P4E1 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
CASC4Q6P4E1 SLC35C1-201ENST00000314134 4171 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CASC4Q6P4E1 KIAA1468-202ENST00000398130 6178 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CASC4Q6P4E1 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CASC4Q6P4E1 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC16.1■□□□□ 0.17
CASC4Q6P4E1 AP002990.1-202ENST00000496634 5064 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
CASC4Q6P4E1 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
CASC4Q6P4E1 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
CASC4Q6P4E1 KRT8P37-201ENST00000451609 1420 ntBASIC16.1■□□□□ 0.17
CASC4Q6P4E1 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CASC4Q6P4E1 TLN1-201ENST00000314888 8823 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CASC4Q6P4E1 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC16.1■□□□□ 0.17
CASC4Q6P4E1 TBC1D1-201ENST00000261439 5700 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CASC4Q6P4E1 CNDP2-201ENST00000324262 5130 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CASC4Q6P4E1 AP3S2-216ENST00000617003 1561 ntBASIC16.09■□□□□ 0.17
CASC4Q6P4E1 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
CASC4Q6P4E1 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC16.09■□□□□ 0.17
CASC4Q6P4E1 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CASC4Q6P4E1 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CASC4Q6P4E1 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
CASC4Q6P4E1 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
CASC4Q6P4E1 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC16.09■□□□□ 0.17
CASC4Q6P4E1 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
CASC4Q6P4E1 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CASC4Q6P4E1 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CASC4Q6P4E1 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CASC4Q6P4E1 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC16.09■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 110.1 ms