Protein–RNA interactions for Protein: Q6ICC9

RTL6, Retrotransposon Gag-like protein 6, humanhuman

Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL6Q6ICC9 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC14.22□□□□□ -0.13
RTL6Q6ICC9 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
RTL6Q6ICC9 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC14.22□□□□□ -0.13
RTL6Q6ICC9 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
RTL6Q6ICC9 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
RTL6Q6ICC9 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC14.22□□□□□ -0.13
RTL6Q6ICC9 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
RTL6Q6ICC9 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
RTL6Q6ICC9 IFT20-203ENST00000395418 825 ntAPPRIS P4 TSL 1 (best) BASIC14.22□□□□□ -0.13
RTL6Q6ICC9 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
RTL6Q6ICC9 TEX26-AS1-201ENST00000411835 1203 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
RTL6Q6ICC9 AL513303.2-201ENST00000413339 536 ntTSL 2 BASIC14.22□□□□□ -0.13
RTL6Q6ICC9 DICER1-AS1-202ENST00000439819 810 ntTSL 3 BASIC14.22□□□□□ -0.13
RTL6Q6ICC9 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC14.22□□□□□ -0.13
RTL6Q6ICC9 ZNF707-203ENST00000442058 562 ntTSL 4 BASIC14.22□□□□□ -0.13
RTL6Q6ICC9 ELFN1-AS1-202ENST00000453348 637 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
RTL6Q6ICC9 SERF1A-205ENST00000507348 663 ntTSL 2 BASIC14.22□□□□□ -0.13
RTL6Q6ICC9 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC14.22□□□□□ -0.13
RTL6Q6ICC9 AP001995.1-201ENST00000531784 1157 ntTSL 4 BASIC14.22□□□□□ -0.13
RTL6Q6ICC9 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC14.22□□□□□ -0.13
RTL6Q6ICC9 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC14.22□□□□□ -0.13
RTL6Q6ICC9 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC14.22□□□□□ -0.13
RTL6Q6ICC9 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
RTL6Q6ICC9 IFT20-216ENST00000588477 774 ntTSL 5 BASIC14.22□□□□□ -0.13
RTL6Q6ICC9 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC14.22□□□□□ -0.13
RTL6Q6ICC9 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
RTL6Q6ICC9 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC14.22□□□□□ -0.13
RTL6Q6ICC9 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
RTL6Q6ICC9 AC079328.2-201ENST00000561241 3354 ntBASIC14.22□□□□□ -0.13
RTL6Q6ICC9 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
RTL6Q6ICC9 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
RTL6Q6ICC9 CCP110-201ENST00000381396 5446 ntAPPRIS ALT1 TSL 1 (best) BASIC14.22□□□□□ -0.13
RTL6Q6ICC9 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
RTL6Q6ICC9 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
RTL6Q6ICC9 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
RTL6Q6ICC9 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC14.22□□□□□ -0.13
RTL6Q6ICC9 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
RTL6Q6ICC9 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC14.22□□□□□ -0.13
RTL6Q6ICC9 SBF1-201ENST00000348911 6045 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
RTL6Q6ICC9 KIF21A-202ENST00000361961 6601 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
RTL6Q6ICC9 AL353997.2-201ENST00000579352 4955 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
RTL6Q6ICC9 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
RTL6Q6ICC9 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC14.22□□□□□ -0.13
RTL6Q6ICC9 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
RTL6Q6ICC9 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
RTL6Q6ICC9 PHYHD1-202ENST00000353176 1374 ntTSL 5 BASIC14.22□□□□□ -0.13
RTL6Q6ICC9 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC14.21□□□□□ -0.13
RTL6Q6ICC9 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
RTL6Q6ICC9 OPA1-208ENST00000392438 6340 ntAPPRIS ALT1 TSL 1 (best) BASIC14.21□□□□□ -0.13
RTL6Q6ICC9 CDC14C-201ENST00000428251 1719 ntBASIC14.21□□□□□ -0.13
RTL6Q6ICC9 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
RTL6Q6ICC9 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC14.21□□□□□ -0.13
RTL6Q6ICC9 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC14.21□□□□□ -0.13
RTL6Q6ICC9 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
RTL6Q6ICC9 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
RTL6Q6ICC9 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC14.21□□□□□ -0.13
RTL6Q6ICC9 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
RTL6Q6ICC9 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC14.21□□□□□ -0.13
RTL6Q6ICC9 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
RTL6Q6ICC9 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
RTL6Q6ICC9 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
RTL6Q6ICC9 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
RTL6Q6ICC9 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
RTL6Q6ICC9 MIOX-203ENST00000395733 1021 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
RTL6Q6ICC9 AC074338.1-201ENST00000416825 156 ntBASIC14.21□□□□□ -0.13
RTL6Q6ICC9 AC112492.5-201ENST00000421897 457 ntBASIC14.21□□□□□ -0.13
RTL6Q6ICC9 FKBP11-203ENST00000453172 959 ntAPPRIS ALT2 TSL 2 BASIC14.21□□□□□ -0.13
RTL6Q6ICC9 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC14.21□□□□□ -0.13
RTL6Q6ICC9 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC14.21□□□□□ -0.13
RTL6Q6ICC9 DNAJC19-209ENST00000491873 769 ntTSL 2 BASIC14.21□□□□□ -0.13
RTL6Q6ICC9 TMEM161B-AS1-212ENST00000513011 833 ntTSL 3 BASIC14.21□□□□□ -0.13
RTL6Q6ICC9 AC005342.2-201ENST00000544163 315 ntTSL 3 BASIC14.21□□□□□ -0.13
RTL6Q6ICC9 FXYD6-216ENST00000584230 566 ntAPPRIS ALT1 TSL 3 BASIC14.21□□□□□ -0.13
RTL6Q6ICC9 AL391069.4-201ENST00000609583 481 ntBASIC14.21□□□□□ -0.13
RTL6Q6ICC9 MIR6752-201ENST00000618442 71 ntBASIC14.21□□□□□ -0.13
RTL6Q6ICC9 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
RTL6Q6ICC9 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC14.21□□□□□ -0.13
RTL6Q6ICC9 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC14.21□□□□□ -0.13
RTL6Q6ICC9 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
RTL6Q6ICC9 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.14
RTL6Q6ICC9 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
RTL6Q6ICC9 ANKHD1-202ENST00000297183 7606 ntTSL 5 BASIC14.21□□□□□ -0.14
RTL6Q6ICC9 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
RTL6Q6ICC9 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC14.21□□□□□ -0.14
RTL6Q6ICC9 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
RTL6Q6ICC9 PHLDB1-223ENST00000600882 5479 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.14
RTL6Q6ICC9 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
RTL6Q6ICC9 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
RTL6Q6ICC9 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
RTL6Q6ICC9 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC14.2□□□□□ -0.14
RTL6Q6ICC9 BLK-205ENST00000529894 2017 ntTSL 5 BASIC14.2□□□□□ -0.14
RTL6Q6ICC9 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC14.2□□□□□ -0.14
RTL6Q6ICC9 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC14.2□□□□□ -0.14
RTL6Q6ICC9 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
RTL6Q6ICC9 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
RTL6Q6ICC9 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC14.2□□□□□ -0.14
RTL6Q6ICC9 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
RTL6Q6ICC9 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
RTL6Q6ICC9 CLK3P2-201ENST00000427566 1453 ntBASIC14.2□□□□□ -0.14
RTL6Q6ICC9 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms