Protein–RNA interactions for Protein: Q5VTB9

RNF220, E3 ubiquitin-protein ligase RNF220, humanhuman

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220Q5VTB9 PRSS8-201ENST00000317508 1872 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
RNF220Q5VTB9 SLITRK2-202ENST00000370490 7672 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
RNF220Q5VTB9 CHRNA3-201ENST00000326828 3202 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
RNF220Q5VTB9 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
RNF220Q5VTB9 EP400NL-206ENST00000446190 3697 ntTSL 2 BASIC15.24■□□□□ 0.03
RNF220Q5VTB9 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC15.24■□□□□ 0.03
RNF220Q5VTB9 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
RNF220Q5VTB9 ARFGAP1-212ENST00000519604 3191 ntTSL 2 BASIC15.24■□□□□ 0.03
RNF220Q5VTB9 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
RNF220Q5VTB9 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
RNF220Q5VTB9 ALDH3A2-226ENST00000631291 3822 ntTSL 5 BASIC15.24■□□□□ 0.03
RNF220Q5VTB9 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
RNF220Q5VTB9 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
RNF220Q5VTB9 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
RNF220Q5VTB9 DUOX1-201ENST00000321429 5738 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
RNF220Q5VTB9 A1CF-202ENST00000373993 1997 ntAPPRIS P4 TSL 1 (best) BASIC15.24■□□□□ 0.03
RNF220Q5VTB9 GLIS2-202ENST00000433375 3705 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
RNF220Q5VTB9 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC15.24■□□□□ 0.03
RNF220Q5VTB9 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC15.24■□□□□ 0.03
RNF220Q5VTB9 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
RNF220Q5VTB9 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC15.24■□□□□ 0.03
RNF220Q5VTB9 UGT3A2-201ENST00000282507 2355 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
RNF220Q5VTB9 SLC5A7-201ENST00000264047 5152 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
RNF220Q5VTB9 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC15.24■□□□□ 0.03
RNF220Q5VTB9 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
RNF220Q5VTB9 PPM1F-203ENST00000407142 5587 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
RNF220Q5VTB9 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
RNF220Q5VTB9 DPM2-202ENST00000373110 738 ntTSL 2 BASIC15.24■□□□□ 0.03
RNF220Q5VTB9 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
RNF220Q5VTB9 PROSER3-202ENST00000396908 2149 ntAPPRIS P5 TSL 1 (best) BASIC15.24■□□□□ 0.03
RNF220Q5VTB9 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
RNF220Q5VTB9 MRPL3P1-201ENST00000400109 1033 ntBASIC15.24■□□□□ 0.03
RNF220Q5VTB9 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC15.24■□□□□ 0.03
RNF220Q5VTB9 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC15.24■□□□□ 0.03
RNF220Q5VTB9 VN2R19P-201ENST00000442399 1052 ntBASIC15.24■□□□□ 0.03
RNF220Q5VTB9 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC15.24■□□□□ 0.03
RNF220Q5VTB9 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC15.24■□□□□ 0.03
RNF220Q5VTB9 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC15.24■□□□□ 0.03
RNF220Q5VTB9 UNC93B6-202ENST00000528242 690 ntBASIC15.24■□□□□ 0.03
RNF220Q5VTB9 POLD4-207ENST00000531239 584 ntTSL 2 BASIC15.24■□□□□ 0.03
RNF220Q5VTB9 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC15.24■□□□□ 0.03
RNF220Q5VTB9 AL031432.2-201ENST00000566714 459 ntBASIC15.24■□□□□ 0.03
RNF220Q5VTB9 AL928711.1-201ENST00000570165 459 ntBASIC15.24■□□□□ 0.03
RNF220Q5VTB9 LITAF-211ENST00000572255 516 ntTSL 4 BASIC15.24■□□□□ 0.03
RNF220Q5VTB9 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC15.24■□□□□ 0.03
RNF220Q5VTB9 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
RNF220Q5VTB9 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC15.24■□□□□ 0.03
RNF220Q5VTB9 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
RNF220Q5VTB9 AL031055.1-201ENST00000606362 631 ntBASIC15.24■□□□□ 0.03
RNF220Q5VTB9 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC15.24■□□□□ 0.03
RNF220Q5VTB9 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC15.24■□□□□ 0.03
RNF220Q5VTB9 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC15.24■□□□□ 0.03
RNF220Q5VTB9 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC15.24■□□□□ 0.03
RNF220Q5VTB9 NRP2-205ENST00000412873 2730 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
RNF220Q5VTB9 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC15.24■□□□□ 0.03
RNF220Q5VTB9 SYCP2L-201ENST00000283141 3130 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
RNF220Q5VTB9 AC079336.5-201ENST00000581360 2480 ntTSL 2 BASIC15.24■□□□□ 0.03
RNF220Q5VTB9 NMUR1-201ENST00000305141 3298 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
RNF220Q5VTB9 AC092919.2-201ENST00000623631 1645 ntBASIC15.24■□□□□ 0.03
RNF220Q5VTB9 C1QTNF1-204ENST00000392445 2833 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
RNF220Q5VTB9 GAS2L2-202ENST00000604641 3014 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
RNF220Q5VTB9 ATXN2L-202ENST00000336783 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
RNF220Q5VTB9 MARK4-201ENST00000262891 3573 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
RNF220Q5VTB9 TRMT1-217ENST00000592062 2579 ntAPPRIS P3 TSL 5 BASIC15.24■□□□□ 0.03
RNF220Q5VTB9 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
RNF220Q5VTB9 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
RNF220Q5VTB9 SOCS2-205ENST00000548537 3733 ntTSL 2 BASIC15.24■□□□□ 0.03
RNF220Q5VTB9 CLIP2-203ENST00000395060 3141 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
RNF220Q5VTB9 PUS1-202ENST00000376649 4094 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
RNF220Q5VTB9 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
RNF220Q5VTB9 AC140479.7-201ENST00000636301 2332 ntBASIC15.23■□□□□ 0.03
RNF220Q5VTB9 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC15.23■□□□□ 0.03
RNF220Q5VTB9 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
RNF220Q5VTB9 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
RNF220Q5VTB9 SLFNL1-204ENST00000372613 2654 ntTSL 2 BASIC15.23■□□□□ 0.03
RNF220Q5VTB9 SMTN-223ENST00000619644 3227 ntTSL 2 BASIC15.23■□□□□ 0.03
RNF220Q5VTB9 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC15.23■□□□□ 0.03
RNF220Q5VTB9 HAL-202ENST00000538703 2637 ntTSL 2 BASIC15.23■□□□□ 0.03
RNF220Q5VTB9 SH3BP5L-201ENST00000366472 3861 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
RNF220Q5VTB9 SP8-203ENST00000617581 3496 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
RNF220Q5VTB9 SUOX-201ENST00000266971 2364 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
RNF220Q5VTB9 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC15.23■□□□□ 0.03
RNF220Q5VTB9 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
RNF220Q5VTB9 HMGA1P7-201ENST00000406908 502 ntBASIC15.23■□□□□ 0.03
RNF220Q5VTB9 PMS2P4-201ENST00000412466 1052 ntBASIC15.23■□□□□ 0.03
RNF220Q5VTB9 IGLL3P-201ENST00000412472 434 ntBASIC15.23■□□□□ 0.03
RNF220Q5VTB9 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC15.23■□□□□ 0.03
RNF220Q5VTB9 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC15.23■□□□□ 0.03
RNF220Q5VTB9 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
RNF220Q5VTB9 PP7080-204ENST00000510714 601 ntTSL 3 BASIC15.23■□□□□ 0.03
RNF220Q5VTB9 IGHV3-22-201ENST00000520721 359 ntBASIC15.23■□□□□ 0.03
RNF220Q5VTB9 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC15.23■□□□□ 0.03
RNF220Q5VTB9 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC15.23■□□□□ 0.03
RNF220Q5VTB9 SLC25A6P4-201ENST00000586535 553 ntBASIC15.23■□□□□ 0.03
RNF220Q5VTB9 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC15.23■□□□□ 0.03
RNF220Q5VTB9 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC15.23■□□□□ 0.03
RNF220Q5VTB9 AMT-204ENST00000427987 1646 ntTSL 5 BASIC15.23■□□□□ 0.03
RNF220Q5VTB9 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
RNF220Q5VTB9 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
RNF220Q5VTB9 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC15.23■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 33 ms