Protein–RNA interactions for Protein: Q5VT25

CDC42BPA, Serine/threonine-protein kinase MRCK alpha, humanhuman

Predictions only

Length 1,732 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPAQ5VT25 STYXL1-201ENST00000248600 1415 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
CDC42BPAQ5VT25 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC23.19■■□□□ 1.3
CDC42BPAQ5VT25 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC23.19■■□□□ 1.3
CDC42BPAQ5VT25 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
CDC42BPAQ5VT25 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC23.18■■□□□ 1.3
CDC42BPAQ5VT25 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
CDC42BPAQ5VT25 PCDHA14-201ENST00000506751 2298 ntBASIC23.18■■□□□ 1.3
CDC42BPAQ5VT25 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
CDC42BPAQ5VT25 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
CDC42BPAQ5VT25 B4GALT3-201ENST00000319769 1911 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
CDC42BPAQ5VT25 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
CDC42BPAQ5VT25 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC23.18■■□□□ 1.3
CDC42BPAQ5VT25 CYP1A1-203ENST00000395049 1594 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
CDC42BPAQ5VT25 KAAG1-201ENST00000274766 1382 ntAPPRIS P1 BASIC23.18■■□□□ 1.3
CDC42BPAQ5VT25 NME2-204ENST00000503064 749 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
CDC42BPAQ5VT25 Metazoa_SRP.69-201ENST00000615730 281 ntBASIC23.18■■□□□ 1.3
CDC42BPAQ5VT25 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC23.18■■□□□ 1.3
CDC42BPAQ5VT25 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
CDC42BPAQ5VT25 TNRC18P3-201ENST00000441896 2691 ntBASIC23.18■■□□□ 1.3
CDC42BPAQ5VT25 CYP2T1P-202ENST00000641596 2535 ntBASIC23.18■■□□□ 1.3
CDC42BPAQ5VT25 TMBIM1-201ENST00000258412 2371 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
CDC42BPAQ5VT25 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
CDC42BPAQ5VT25 PLCXD2-204ENST00000477665 1721 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
CDC42BPAQ5VT25 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
CDC42BPAQ5VT25 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
CDC42BPAQ5VT25 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
CDC42BPAQ5VT25 AP003065.1-201ENST00000540912 562 ntTSL 4 BASIC23.17■■□□□ 1.3
CDC42BPAQ5VT25 AC138696.2-201ENST00000607376 223 ntBASIC23.17■■□□□ 1.3
CDC42BPAQ5VT25 AC006449.5-201ENST00000610658 2098 ntBASIC23.17■■□□□ 1.3
CDC42BPAQ5VT25 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
CDC42BPAQ5VT25 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC23.17■■□□□ 1.3
CDC42BPAQ5VT25 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC23.17■■□□□ 1.3
CDC42BPAQ5VT25 SMARCE1-205ENST00000431889 1569 ntTSL 2 BASIC23.17■■□□□ 1.3
CDC42BPAQ5VT25 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC23.17■■□□□ 1.3
CDC42BPAQ5VT25 AC011840.2-201ENST00000563063 1520 ntBASIC23.17■■□□□ 1.3
CDC42BPAQ5VT25 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC23.17■■□□□ 1.3
CDC42BPAQ5VT25 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC23.16■■□□□ 1.3
CDC42BPAQ5VT25 TMEM40-201ENST00000264728 984 ntAPPRIS P3 TSL 2 BASIC23.16■■□□□ 1.3
CDC42BPAQ5VT25 AL645608.5-201ENST00000398216 443 ntTSL 3 BASIC23.16■■□□□ 1.3
CDC42BPAQ5VT25 MSRA-203ENST00000441698 788 ntTSL 2 BASIC23.16■■□□□ 1.3
CDC42BPAQ5VT25 AC243964.2-201ENST00000590796 829 ntTSL 5 BASIC23.16■■□□□ 1.3
CDC42BPAQ5VT25 SNX1-214ENST00000625244 324 ntTSL 5 BASIC23.16■■□□□ 1.3
CDC42BPAQ5VT25 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
CDC42BPAQ5VT25 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
CDC42BPAQ5VT25 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC23.16■■□□□ 1.3
CDC42BPAQ5VT25 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
CDC42BPAQ5VT25 LINC01667-202ENST00000623919 1422 ntTSL 5 BASIC23.16■■□□□ 1.3
CDC42BPAQ5VT25 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC23.16■■□□□ 1.3
CDC42BPAQ5VT25 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC23.16■■□□□ 1.3
CDC42BPAQ5VT25 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
CDC42BPAQ5VT25 IGHA2-202ENST00000497872 1320 ntAPPRIS P5 TSL 1 (best) BASIC23.16■■□□□ 1.3
CDC42BPAQ5VT25 SPAG11A-203ENST00000351436 534 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
CDC42BPAQ5VT25 SPAG11B-204ENST00000361111 534 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
CDC42BPAQ5VT25 FBXO44-203ENST00000376760 822 ntTSL 2 BASIC23.16■■□□□ 1.3
CDC42BPAQ5VT25 LINC01352-201ENST00000431347 962 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
CDC42BPAQ5VT25 C14orf178-202ENST00000439131 632 ntAPPRIS ALT2 TSL 1 (best) BASIC23.16■■□□□ 1.3
CDC42BPAQ5VT25 MAATS1-203ENST00000463700 939 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
CDC42BPAQ5VT25 FAM86B1-218ENST00000534520 808 ntTSL 2 BASIC23.16■■□□□ 1.3
CDC42BPAQ5VT25 AC090164.2-201ENST00000611487 516 ntBASIC23.16■■□□□ 1.3
CDC42BPAQ5VT25 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC23.16■■□□□ 1.3
CDC42BPAQ5VT25 YRDCP1-201ENST00000621419 643 ntBASIC23.16■■□□□ 1.3
CDC42BPAQ5VT25 AC002472.3-201ENST00000640124 621 ntBASIC23.16■■□□□ 1.3
CDC42BPAQ5VT25 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
CDC42BPAQ5VT25 SLC38A5-213ENST00000620913 1993 ntAPPRIS P1 TSL 5 BASIC23.16■■□□□ 1.3
CDC42BPAQ5VT25 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
CDC42BPAQ5VT25 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC23.15■■□□□ 1.3
CDC42BPAQ5VT25 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC23.15■■□□□ 1.3
CDC42BPAQ5VT25 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC23.15■■□□□ 1.3
CDC42BPAQ5VT25 PTOV1-214ENST00000600603 1443 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
CDC42BPAQ5VT25 FZD10-202ENST00000539839 3282 ntBASIC23.15■■□□□ 1.3
CDC42BPAQ5VT25 INE2-201ENST00000630399 1874 ntBASIC23.15■■□□□ 1.3
CDC42BPAQ5VT25 PSMB5-202ENST00000361611 1294 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
CDC42BPAQ5VT25 PSMB5-203ENST00000425762 900 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
CDC42BPAQ5VT25 VAMP8-203ENST00000432071 664 ntTSL 3 BASIC23.15■■□□□ 1.3
CDC42BPAQ5VT25 FTLP1-201ENST00000449155 526 ntBASIC23.15■■□□□ 1.3
CDC42BPAQ5VT25 AC125604.1-201ENST00000496255 707 ntBASIC23.15■■□□□ 1.3
CDC42BPAQ5VT25 UCHL1-207ENST00000508768 827 ntTSL 3 BASIC23.15■■□□□ 1.3
CDC42BPAQ5VT25 AL135838.1-202ENST00000556411 441 ntTSL 2 BASIC23.15■■□□□ 1.3
CDC42BPAQ5VT25 CROCCP3-204ENST00000590118 574 ntTSL 4 BASIC23.15■■□□□ 1.3
CDC42BPAQ5VT25 FAAP24-204ENST00000590179 784 ntTSL 2 BASIC23.15■■□□□ 1.3
CDC42BPAQ5VT25 IGFLR1-211ENST00000592889 782 ntAPPRIS ALT2 TSL 1 (best) BASIC23.15■■□□□ 1.3
CDC42BPAQ5VT25 CLEC11A-202ENST00000599973 1026 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
CDC42BPAQ5VT25 LINC00969-254ENST00000625358 962 ntTSL 5 BASIC23.15■■□□□ 1.3
CDC42BPAQ5VT25 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC23.15■■□□□ 1.3
CDC42BPAQ5VT25 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
CDC42BPAQ5VT25 SLC9A7P1-202ENST00000556476 2239 ntBASIC23.15■■□□□ 1.3
CDC42BPAQ5VT25 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC23.15■■□□□ 1.3
CDC42BPAQ5VT25 KRT8P29-201ENST00000420409 1371 ntBASIC23.15■■□□□ 1.3
CDC42BPAQ5VT25 TAMM41-205ENST00000444133 1619 ntTSL 2 BASIC23.15■■□□□ 1.3
CDC42BPAQ5VT25 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC23.15■■□□□ 1.3
CDC42BPAQ5VT25 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
CDC42BPAQ5VT25 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC23.14■■□□□ 1.3
CDC42BPAQ5VT25 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
CDC42BPAQ5VT25 MAX-201ENST00000246163 897 ntTSL 1 (best) BASIC23.14■■□□□ 1.3
CDC42BPAQ5VT25 AC009403.1-204ENST00000469539 597 ntTSL 2 BASIC23.14■■□□□ 1.3
CDC42BPAQ5VT25 AC009779.1-201ENST00000551138 283 ntBASIC23.14■■□□□ 1.3
CDC42BPAQ5VT25 AC023824.4-202ENST00000569557 849 ntTSL 3 BASIC23.14■■□□□ 1.3
CDC42BPAQ5VT25 AL162426.1-201ENST00000624141 743 ntBASIC23.14■■□□□ 1.3
CDC42BPAQ5VT25 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC23.14■■□□□ 1.3
CDC42BPAQ5VT25 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC23.14■■□□□ 1.3
Retrieved 100 of 98,524 protein–RNA pairs in 39.3 ms