Protein–RNA interactions for Protein: Q5GLZ8

HERC4, Probable E3 ubiquitin-protein ligase HERC4, humanhuman

Predicted RBP Predictions only

Length 1,057 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4Q5GLZ8 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
HERC4Q5GLZ8 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
HERC4Q5GLZ8 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
HERC4Q5GLZ8 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
HERC4Q5GLZ8 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
HERC4Q5GLZ8 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
HERC4Q5GLZ8 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
HERC4Q5GLZ8 TMEM14B-212ENST00000475942 992 ntTSL 2 BASIC17.58■□□□□ 0.4
HERC4Q5GLZ8 PTK7-212ENST00000476760 902 ntTSL 2 BASIC17.58■□□□□ 0.4
HERC4Q5GLZ8 TMEM161B-AS1-212ENST00000513011 833 ntTSL 3 BASIC17.58■□□□□ 0.4
HERC4Q5GLZ8 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC17.58■□□□□ 0.4
HERC4Q5GLZ8 AC073592.8-201ENST00000624126 511 ntBASIC17.58■□□□□ 0.4
HERC4Q5GLZ8 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC17.58■□□□□ 0.4
HERC4Q5GLZ8 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
HERC4Q5GLZ8 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC17.58■□□□□ 0.4
HERC4Q5GLZ8 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
HERC4Q5GLZ8 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC17.58■□□□□ 0.4
HERC4Q5GLZ8 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
HERC4Q5GLZ8 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
HERC4Q5GLZ8 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
HERC4Q5GLZ8 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC17.58■□□□□ 0.4
HERC4Q5GLZ8 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
HERC4Q5GLZ8 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
HERC4Q5GLZ8 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC17.57■□□□□ 0.4
HERC4Q5GLZ8 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC17.57■□□□□ 0.4
HERC4Q5GLZ8 AL607033.1-201ENST00000623900 1599 ntBASIC17.57■□□□□ 0.4
HERC4Q5GLZ8 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
HERC4Q5GLZ8 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
HERC4Q5GLZ8 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
HERC4Q5GLZ8 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC17.57■□□□□ 0.4
HERC4Q5GLZ8 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
HERC4Q5GLZ8 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
HERC4Q5GLZ8 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC17.57■□□□□ 0.4
HERC4Q5GLZ8 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
HERC4Q5GLZ8 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
HERC4Q5GLZ8 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
HERC4Q5GLZ8 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
HERC4Q5GLZ8 AC020658.6-201ENST00000623564 1870 ntBASIC17.57■□□□□ 0.4
HERC4Q5GLZ8 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC17.57■□□□□ 0.4
HERC4Q5GLZ8 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC17.57■□□□□ 0.4
HERC4Q5GLZ8 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
HERC4Q5GLZ8 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC17.57■□□□□ 0.4
HERC4Q5GLZ8 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
HERC4Q5GLZ8 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
HERC4Q5GLZ8 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
HERC4Q5GLZ8 VAMP4-202ENST00000367740 1193 ntAPPRIS ALT1 TSL 1 (best) BASIC17.57■□□□□ 0.4
HERC4Q5GLZ8 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
HERC4Q5GLZ8 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
HERC4Q5GLZ8 IFITM3-201ENST00000399808 808 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
HERC4Q5GLZ8 ZFAND2B-203ENST00000409206 1159 ntTSL 2 BASIC17.57■□□□□ 0.4
HERC4Q5GLZ8 AC136604.1-201ENST00000418535 575 ntBASIC17.57■□□□□ 0.4
HERC4Q5GLZ8 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
HERC4Q5GLZ8 GIMAP3P-201ENST00000495150 836 ntBASIC17.57■□□□□ 0.4
HERC4Q5GLZ8 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC17.57■□□□□ 0.4
HERC4Q5GLZ8 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC17.57■□□□□ 0.4
HERC4Q5GLZ8 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC17.57■□□□□ 0.4
HERC4Q5GLZ8 AC027369.6-201ENST00000525520 931 ntBASIC17.57■□□□□ 0.4
HERC4Q5GLZ8 CSF1R-209ENST00000543093 921 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
HERC4Q5GLZ8 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC17.57■□□□□ 0.4
HERC4Q5GLZ8 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
HERC4Q5GLZ8 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
HERC4Q5GLZ8 MIR6069-201ENST00000620069 79 ntBASIC17.57■□□□□ 0.4
HERC4Q5GLZ8 AL033527.5-202ENST00000641632 1098 ntBASIC17.57■□□□□ 0.4
HERC4Q5GLZ8 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC17.57■□□□□ 0.4
HERC4Q5GLZ8 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
HERC4Q5GLZ8 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
HERC4Q5GLZ8 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
HERC4Q5GLZ8 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
HERC4Q5GLZ8 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
HERC4Q5GLZ8 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
HERC4Q5GLZ8 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC17.57■□□□□ 0.4
HERC4Q5GLZ8 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
HERC4Q5GLZ8 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
HERC4Q5GLZ8 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
HERC4Q5GLZ8 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC17.57■□□□□ 0.4
HERC4Q5GLZ8 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
HERC4Q5GLZ8 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
HERC4Q5GLZ8 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
HERC4Q5GLZ8 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC17.56■□□□□ 0.4
HERC4Q5GLZ8 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
HERC4Q5GLZ8 AC138969.3-201ENST00000546612 1459 ntBASIC17.56■□□□□ 0.4
HERC4Q5GLZ8 AC138932.2-201ENST00000548268 1459 ntBASIC17.56■□□□□ 0.4
HERC4Q5GLZ8 AC126755.4-201ENST00000549796 1459 ntBASIC17.56■□□□□ 0.4
HERC4Q5GLZ8 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
HERC4Q5GLZ8 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC17.56■□□□□ 0.4
HERC4Q5GLZ8 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC17.56■□□□□ 0.4
HERC4Q5GLZ8 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
HERC4Q5GLZ8 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
HERC4Q5GLZ8 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
HERC4Q5GLZ8 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
HERC4Q5GLZ8 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC17.56■□□□□ 0.4
HERC4Q5GLZ8 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
HERC4Q5GLZ8 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC17.56■□□□□ 0.4
HERC4Q5GLZ8 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC17.56■□□□□ 0.4
HERC4Q5GLZ8 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC17.56■□□□□ 0.4
HERC4Q5GLZ8 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC17.56■□□□□ 0.4
HERC4Q5GLZ8 AC105250.1-201ENST00000509378 2057 ntBASIC17.56■□□□□ 0.4
HERC4Q5GLZ8 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
HERC4Q5GLZ8 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
HERC4Q5GLZ8 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 41.7 ms