Protein–RNA interactions for Protein: Q3MJ40

CCDC144B, Coiled-coil domain-containing protein 144B, humanhuman

Predictions only

Length 725 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144BQ3MJ40 AC123567.1-201ENST00000548294 1261 ntBASIC18.26■□□□□ 0.51
CCDC144BQ3MJ40 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC18.26■□□□□ 0.51
CCDC144BQ3MJ40 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC18.26■□□□□ 0.51
CCDC144BQ3MJ40 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC18.26■□□□□ 0.51
CCDC144BQ3MJ40 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC18.26■□□□□ 0.51
CCDC144BQ3MJ40 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC18.26■□□□□ 0.51
CCDC144BQ3MJ40 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC18.26■□□□□ 0.51
CCDC144BQ3MJ40 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC18.26■□□□□ 0.51
CCDC144BQ3MJ40 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CCDC144BQ3MJ40 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CCDC144BQ3MJ40 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CCDC144BQ3MJ40 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC18.26■□□□□ 0.51
CCDC144BQ3MJ40 SYTL3-205ENST00000611299 2896 ntAPPRIS ALT1 TSL 5 BASIC18.26■□□□□ 0.51
CCDC144BQ3MJ40 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC18.26■□□□□ 0.51
CCDC144BQ3MJ40 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
CCDC144BQ3MJ40 DMRT2-202ENST00000302441 1495 ntTSL 5 BASIC18.26■□□□□ 0.51
CCDC144BQ3MJ40 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CCDC144BQ3MJ40 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC18.26■□□□□ 0.51
CCDC144BQ3MJ40 AC136621.1-201ENST00000624017 2304 ntBASIC18.26■□□□□ 0.51
CCDC144BQ3MJ40 AC020659.1-201ENST00000309874 2900 ntTSL 2 BASIC18.26■□□□□ 0.51
CCDC144BQ3MJ40 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC18.26■□□□□ 0.51
CCDC144BQ3MJ40 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
CCDC144BQ3MJ40 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC18.26■□□□□ 0.51
CCDC144BQ3MJ40 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC18.25■□□□□ 0.51
CCDC144BQ3MJ40 HTR7-201ENST00000277874 3028 ntAPPRIS P4 TSL 1 (best) BASIC18.25■□□□□ 0.51
CCDC144BQ3MJ40 EOMES-201ENST00000295743 3386 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CCDC144BQ3MJ40 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
CCDC144BQ3MJ40 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CCDC144BQ3MJ40 SSR4P1-203ENST00000599569 2260 ntBASIC18.25■□□□□ 0.51
CCDC144BQ3MJ40 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CCDC144BQ3MJ40 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
CCDC144BQ3MJ40 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC18.25■□□□□ 0.51
CCDC144BQ3MJ40 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
CCDC144BQ3MJ40 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC18.25■□□□□ 0.51
CCDC144BQ3MJ40 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC18.25■□□□□ 0.51
CCDC144BQ3MJ40 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
CCDC144BQ3MJ40 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CCDC144BQ3MJ40 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CCDC144BQ3MJ40 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CCDC144BQ3MJ40 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CCDC144BQ3MJ40 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC18.25■□□□□ 0.51
CCDC144BQ3MJ40 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC18.25■□□□□ 0.51
CCDC144BQ3MJ40 AL513303.2-201ENST00000413339 536 ntTSL 2 BASIC18.25■□□□□ 0.51
CCDC144BQ3MJ40 AL133456.1-201ENST00000415655 577 ntTSL 4 BASIC18.25■□□□□ 0.51
CCDC144BQ3MJ40 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC18.25■□□□□ 0.51
CCDC144BQ3MJ40 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC18.25■□□□□ 0.51
CCDC144BQ3MJ40 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC18.25■□□□□ 0.51
CCDC144BQ3MJ40 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CCDC144BQ3MJ40 STMN4-207ENST00000523048 1224 ntTSL 2 BASIC18.25■□□□□ 0.51
CCDC144BQ3MJ40 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
CCDC144BQ3MJ40 AC106886.1-201ENST00000568660 600 ntBASIC18.25■□□□□ 0.51
CCDC144BQ3MJ40 AC023157.3-201ENST00000619086 2088 ntBASIC18.25■□□□□ 0.51
CCDC144BQ3MJ40 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC18.25■□□□□ 0.51
CCDC144BQ3MJ40 MYLK2-202ENST00000375994 2956 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CCDC144BQ3MJ40 RPS23-201ENST00000296674 3437 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CCDC144BQ3MJ40 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC18.25■□□□□ 0.51
CCDC144BQ3MJ40 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC18.25■□□□□ 0.51
CCDC144BQ3MJ40 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC18.25■□□□□ 0.51
CCDC144BQ3MJ40 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
CCDC144BQ3MJ40 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CCDC144BQ3MJ40 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC18.25■□□□□ 0.51
CCDC144BQ3MJ40 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC18.25■□□□□ 0.51
CCDC144BQ3MJ40 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CCDC144BQ3MJ40 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
CCDC144BQ3MJ40 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CCDC144BQ3MJ40 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC18.24■□□□□ 0.51
CCDC144BQ3MJ40 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CCDC144BQ3MJ40 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CCDC144BQ3MJ40 ATP6V0B-201ENST00000236067 944 ntTSL 2 BASIC18.24■□□□□ 0.51
CCDC144BQ3MJ40 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CCDC144BQ3MJ40 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
CCDC144BQ3MJ40 KRTAP10-1-201ENST00000400375 1215 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
CCDC144BQ3MJ40 MIR1909-201ENST00000411312 80 ntBASIC18.24■□□□□ 0.51
CCDC144BQ3MJ40 AC098850.1-201ENST00000419919 790 ntBASIC18.24■□□□□ 0.51
CCDC144BQ3MJ40 AL157832.1-201ENST00000428273 495 ntTSL 2 BASIC18.24■□□□□ 0.51
CCDC144BQ3MJ40 AL031283.3-201ENST00000439788 727 ntTSL 3 BASIC18.24■□□□□ 0.51
CCDC144BQ3MJ40 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC18.24■□□□□ 0.51
CCDC144BQ3MJ40 ATP6V0B-211ENST00000498664 825 ntTSL 2 BASIC18.24■□□□□ 0.51
CCDC144BQ3MJ40 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC18.24■□□□□ 0.51
CCDC144BQ3MJ40 AC008969.1-205ENST00000553254 876 ntTSL 2 BASIC18.24■□□□□ 0.51
CCDC144BQ3MJ40 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC18.24■□□□□ 0.51
CCDC144BQ3MJ40 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
CCDC144BQ3MJ40 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC18.24■□□□□ 0.51
CCDC144BQ3MJ40 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC18.24■□□□□ 0.51
CCDC144BQ3MJ40 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CCDC144BQ3MJ40 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CCDC144BQ3MJ40 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CCDC144BQ3MJ40 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CCDC144BQ3MJ40 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC18.24■□□□□ 0.51
CCDC144BQ3MJ40 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
CCDC144BQ3MJ40 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC18.24■□□□□ 0.51
CCDC144BQ3MJ40 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CCDC144BQ3MJ40 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
CCDC144BQ3MJ40 PGR-210ENST00000619228 3038 ntTSL 5 BASIC18.24■□□□□ 0.51
CCDC144BQ3MJ40 LMNA-201ENST00000347559 3137 ntTSL 5 BASIC18.24■□□□□ 0.51
CCDC144BQ3MJ40 PCGF3-213ENST00000620529 1899 ntBASIC18.24■□□□□ 0.51
CCDC144BQ3MJ40 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
CCDC144BQ3MJ40 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CCDC144BQ3MJ40 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
CCDC144BQ3MJ40 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC18.24■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms