Protein–RNA interactions for Protein: Q2KHR2

RFX7, DNA-binding protein RFX7, humanhuman

Predictions only

Length 1,363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX7Q2KHR2 AC011489.1-202ENST00000586556 618 ntTSL 2 BASIC18.83■□□□□ 0.61
RFX7Q2KHR2 TBCB-211ENST00000589996 724 ntTSL 3 BASIC18.83■□□□□ 0.61
RFX7Q2KHR2 ZSCAN30-208ENST00000592278 731 ntTSL 4 BASIC18.83■□□□□ 0.61
RFX7Q2KHR2 AL049840.4-201ENST00000602422 811 ntBASIC18.83■□□□□ 0.61
RFX7Q2KHR2 COX11-210ENST00000639671 696 ntBASIC18.83■□□□□ 0.61
RFX7Q2KHR2 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC18.83■□□□□ 0.61
RFX7Q2KHR2 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC18.83■□□□□ 0.61
RFX7Q2KHR2 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC18.83■□□□□ 0.61
RFX7Q2KHR2 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC18.83■□□□□ 0.61
RFX7Q2KHR2 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.61
RFX7Q2KHR2 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.61
RFX7Q2KHR2 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
RFX7Q2KHR2 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
RFX7Q2KHR2 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
RFX7Q2KHR2 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC18.83■□□□□ 0.6
RFX7Q2KHR2 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC18.83■□□□□ 0.6
RFX7Q2KHR2 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
RFX7Q2KHR2 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC18.83■□□□□ 0.6
RFX7Q2KHR2 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC18.83■□□□□ 0.6
RFX7Q2KHR2 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC18.83■□□□□ 0.6
RFX7Q2KHR2 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
RFX7Q2KHR2 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC18.83■□□□□ 0.6
RFX7Q2KHR2 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC18.82■□□□□ 0.6
RFX7Q2KHR2 KRTAP19-3-201ENST00000334063 522 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
RFX7Q2KHR2 IFITM3-201ENST00000399808 808 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
RFX7Q2KHR2 AC243836.1-201ENST00000416696 438 ntTSL 3 BASIC18.82■□□□□ 0.6
RFX7Q2KHR2 MPZL1-209ENST00000474859 630 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
RFX7Q2KHR2 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
RFX7Q2KHR2 BX927359.1-201ENST00000556073 543 ntTSL 2 BASIC18.82■□□□□ 0.6
RFX7Q2KHR2 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
RFX7Q2KHR2 C17orf62-239ENST00000585080 741 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
RFX7Q2KHR2 MIR6775-201ENST00000617557 69 ntBASIC18.82■□□□□ 0.6
RFX7Q2KHR2 GPR39-203ENST00000622084 900 ntTSL 5 BASIC18.82■□□□□ 0.6
RFX7Q2KHR2 CU634019.7-201ENST00000624153 1185 ntBASIC18.82■□□□□ 0.6
RFX7Q2KHR2 FP236241.2-201ENST00000624906 1185 ntBASIC18.82■□□□□ 0.6
RFX7Q2KHR2 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
RFX7Q2KHR2 AL162727.3-201ENST00000635661 2787 ntBASIC18.82■□□□□ 0.6
RFX7Q2KHR2 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
RFX7Q2KHR2 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC18.82■□□□□ 0.6
RFX7Q2KHR2 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC18.82■□□□□ 0.6
RFX7Q2KHR2 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
RFX7Q2KHR2 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
RFX7Q2KHR2 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC18.82■□□□□ 0.6
RFX7Q2KHR2 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
RFX7Q2KHR2 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
RFX7Q2KHR2 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
RFX7Q2KHR2 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
RFX7Q2KHR2 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
RFX7Q2KHR2 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
RFX7Q2KHR2 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC18.82■□□□□ 0.6
RFX7Q2KHR2 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
RFX7Q2KHR2 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
RFX7Q2KHR2 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
RFX7Q2KHR2 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC18.82■□□□□ 0.6
RFX7Q2KHR2 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC18.82■□□□□ 0.6
RFX7Q2KHR2 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
RFX7Q2KHR2 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
RFX7Q2KHR2 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
RFX7Q2KHR2 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RFX7Q2KHR2 CSF2-201ENST00000296871 787 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RFX7Q2KHR2 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
RFX7Q2KHR2 SGK2-207ENST00000426287 1182 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
RFX7Q2KHR2 MACROD2-AS1-201ENST00000439451 1230 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
RFX7Q2KHR2 KRT223P-202ENST00000449164 1292 ntBASIC18.81■□□□□ 0.6
RFX7Q2KHR2 AC009133.2-201ENST00000566537 547 ntTSL 4 BASIC18.81■□□□□ 0.6
RFX7Q2KHR2 AC120045.2-201ENST00000567334 178 ntBASIC18.81■□□□□ 0.6
RFX7Q2KHR2 C19orf53-206ENST00000593274 491 ntTSL 2 BASIC18.81■□□□□ 0.6
RFX7Q2KHR2 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC18.81■□□□□ 0.6
RFX7Q2KHR2 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC18.81■□□□□ 0.6
RFX7Q2KHR2 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC18.81■□□□□ 0.6
RFX7Q2KHR2 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
RFX7Q2KHR2 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
RFX7Q2KHR2 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
RFX7Q2KHR2 TBP-206ENST00000540980 1701 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
RFX7Q2KHR2 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RFX7Q2KHR2 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
RFX7Q2KHR2 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
RFX7Q2KHR2 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC18.81■□□□□ 0.6
RFX7Q2KHR2 LTF-203ENST00000426532 2494 ntTSL 2 BASIC18.81■□□□□ 0.6
RFX7Q2KHR2 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC18.81■□□□□ 0.6
RFX7Q2KHR2 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RFX7Q2KHR2 AL109954.1-202ENST00000564051 2148 ntBASIC18.81■□□□□ 0.6
RFX7Q2KHR2 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RFX7Q2KHR2 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RFX7Q2KHR2 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RFX7Q2KHR2 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
RFX7Q2KHR2 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC18.81■□□□□ 0.6
RFX7Q2KHR2 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC18.81■□□□□ 0.6
RFX7Q2KHR2 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
RFX7Q2KHR2 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RFX7Q2KHR2 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
RFX7Q2KHR2 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC18.81■□□□□ 0.6
RFX7Q2KHR2 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
RFX7Q2KHR2 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC18.81■□□□□ 0.6
RFX7Q2KHR2 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
RFX7Q2KHR2 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC18.81■□□□□ 0.6
RFX7Q2KHR2 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RFX7Q2KHR2 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RFX7Q2KHR2 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
RFX7Q2KHR2 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 73.1 ms