Protein–RNA interactions for Protein: Q08722

CD47, Leukocyte surface antigen CD47, humanhuman

Predictions only

Length 323 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD47Q08722 RHOQP3-201ENST00000437982 621 ntBASIC14.68□□□□□ -0.06
CD47Q08722 FIS1-203ENST00000442303 631 ntTSL 3 BASIC14.68□□□□□ -0.06
CD47Q08722 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC14.68□□□□□ -0.06
CD47Q08722 HS6ST1P1-201ENST00000481504 1234 ntBASIC14.68□□□□□ -0.06
CD47Q08722 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC14.68□□□□□ -0.06
CD47Q08722 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
CD47Q08722 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
CD47Q08722 RPL28-209ENST00000560055 670 ntTSL 3 BASIC14.68□□□□□ -0.06
CD47Q08722 AC034105.1-201ENST00000563488 319 ntBASIC14.68□□□□□ -0.06
CD47Q08722 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC14.68□□□□□ -0.06
CD47Q08722 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
CD47Q08722 ZDHHC3-201ENST00000296127 3101 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
CD47Q08722 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
CD47Q08722 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
CD47Q08722 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC14.68□□□□□ -0.06
CD47Q08722 TKT-202ENST00000423516 2075 ntTSL 2 BASIC14.68□□□□□ -0.06
CD47Q08722 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CD47Q08722 TGIF2-202ENST00000373874 3432 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
CD47Q08722 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CD47Q08722 UBXN11-204ENST00000374217 1846 ntAPPRIS ALT2 TSL 2 BASIC14.68□□□□□ -0.06
CD47Q08722 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
CD47Q08722 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC14.68□□□□□ -0.06
CD47Q08722 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC14.68□□□□□ -0.06
CD47Q08722 KDM5C-205ENST00000404049 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
CD47Q08722 PVR-202ENST00000344956 3166 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
CD47Q08722 CACTIN-203ENST00000429344 3612 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CD47Q08722 TRIP10-208ENST00000596758 1920 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
CD47Q08722 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC14.68□□□□□ -0.06
CD47Q08722 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
CD47Q08722 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
CD47Q08722 INPP5D-201ENST00000359570 5274 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
CD47Q08722 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
CD47Q08722 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
CD47Q08722 PPM1F-203ENST00000407142 5587 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
CD47Q08722 CCNDBP1-201ENST00000300213 3660 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CD47Q08722 SRSF2-203ENST00000392485 2885 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CD47Q08722 TP53INP1-201ENST00000342697 5638 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CD47Q08722 AL139423.1-201ENST00000606802 7923 ntTSL 5 BASIC14.67□□□□□ -0.06
CD47Q08722 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
CD47Q08722 AC025580.3-201ENST00000617932 1424 ntBASIC14.67□□□□□ -0.06
CD47Q08722 ERN2-202ENST00000457008 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
CD47Q08722 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CD47Q08722 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
CD47Q08722 PCDHA3-202ENST00000532566 4594 ntBASIC14.67□□□□□ -0.06
CD47Q08722 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC14.67□□□□□ -0.06
CD47Q08722 SEMA3G-201ENST00000231721 4899 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CD47Q08722 AMT-204ENST00000427987 1646 ntTSL 5 BASIC14.67□□□□□ -0.06
CD47Q08722 AP4E1-201ENST00000261842 6758 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CD47Q08722 E2F3-201ENST00000346618 4749 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
CD47Q08722 SLC22A15-202ENST00000369503 4720 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CD47Q08722 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
CD47Q08722 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
CD47Q08722 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CD47Q08722 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC14.67□□□□□ -0.06
CD47Q08722 SLC1A7-206ENST00000620347 2873 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
CD47Q08722 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CD47Q08722 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CD47Q08722 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
CD47Q08722 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
CD47Q08722 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
CD47Q08722 AC245100.5-201ENST00000452108 331 ntBASIC14.67□□□□□ -0.06
CD47Q08722 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC14.67□□□□□ -0.06
CD47Q08722 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC14.67□□□□□ -0.06
CD47Q08722 NMU-203ENST00000507338 658 ntTSL 3 BASIC14.67□□□□□ -0.06
CD47Q08722 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC14.67□□□□□ -0.06
CD47Q08722 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC14.67□□□□□ -0.06
CD47Q08722 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC14.67□□□□□ -0.06
CD47Q08722 AC120114.3-201ENST00000611923 658 ntBASIC14.67□□□□□ -0.06
CD47Q08722 AQP6-205ENST00000618286 829 ntTSL 5 BASIC14.67□□□□□ -0.06
CD47Q08722 AC004877.2-201ENST00000623941 599 ntBASIC14.67□□□□□ -0.06
CD47Q08722 ELFN2-207ENST00000613079 8360 ntAPPRIS P1 TSL 4 BASIC14.67□□□□□ -0.06
CD47Q08722 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CD47Q08722 TERT-201ENST00000310581 4018 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
CD47Q08722 ZNF259P1-201ENST00000407656 1365 ntBASIC14.67□□□□□ -0.06
CD47Q08722 RIMS1-216ENST00000521978 5079 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CD47Q08722 ANKRD46-205ENST00000520311 3270 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
CD47Q08722 ZMYND15-202ENST00000433935 2411 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
CD47Q08722 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
CD47Q08722 NR4A3-201ENST00000330847 4982 ntAPPRIS P4 TSL 5 BASIC14.67□□□□□ -0.06
CD47Q08722 NAALADL1-204ENST00000358658 2699 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CD47Q08722 ATG2A-201ENST00000377264 6357 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CD47Q08722 RBPMS-201ENST00000287771 2974 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
CD47Q08722 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC14.66□□□□□ -0.06
CD47Q08722 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
CD47Q08722 RCSD1-202ENST00000367854 3135 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
CD47Q08722 PRPH-201ENST00000257860 3245 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CD47Q08722 CEP170B-204ENST00000556508 6683 ntTSL 5 BASIC14.66□□□□□ -0.06
CD47Q08722 LINC00639-201ENST00000553932 4496 ntTSL 2 BASIC14.66□□□□□ -0.06
CD47Q08722 PRF1-201ENST00000373209 2492 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CD47Q08722 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC14.66□□□□□ -0.06
CD47Q08722 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC14.66□□□□□ -0.06
CD47Q08722 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC14.66□□□□□ -0.06
CD47Q08722 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
CD47Q08722 ADCY2-201ENST00000338316 6575 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CD47Q08722 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
CD47Q08722 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CD47Q08722 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CD47Q08722 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CD47Q08722 FALEC-201ENST00000416894 566 ntTSL 3 BASIC14.66□□□□□ -0.06
CD47Q08722 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC14.66□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms