Protein–RNA interactions for Protein: Q07654

TFF3, Trefoil factor 3, humanhuman

Predictions only

Length 80 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TFF3Q07654 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC13.8□□□□□ -0.2
TFF3Q07654 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
TFF3Q07654 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC13.8□□□□□ -0.2
TFF3Q07654 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
TFF3Q07654 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC13.8□□□□□ -0.2
TFF3Q07654 LOX-206ENST00000639739 1626 ntTSL 5 BASIC13.8□□□□□ -0.2
TFF3Q07654 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
TFF3Q07654 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
TFF3Q07654 NAT8-201ENST00000272425 947 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
TFF3Q07654 CCDC88B-201ENST00000301897 870 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
TFF3Q07654 ZBTB12BP-201ENST00000314232 1122 ntBASIC13.8□□□□□ -0.2
TFF3Q07654 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
TFF3Q07654 LAMA4-203ENST00000368638 1061 ntTSL 2 BASIC13.8□□□□□ -0.2
TFF3Q07654 MOGAT3-202ENST00000379423 933 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
TFF3Q07654 NDUFC1-203ENST00000394228 761 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
TFF3Q07654 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC13.8□□□□□ -0.2
TFF3Q07654 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
TFF3Q07654 DRGX-202ENST00000434016 955 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
TFF3Q07654 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC13.8□□□□□ -0.2
TFF3Q07654 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC13.8□□□□□ -0.2
TFF3Q07654 AC099548.2-209ENST00000480264 625 ntBASIC13.8□□□□□ -0.2
TFF3Q07654 CRYGN-205ENST00000491928 698 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
TFF3Q07654 AC106760.1-201ENST00000508690 800 ntBASIC13.8□□□□□ -0.2
TFF3Q07654 AC012531.3-201ENST00000513209 777 ntAPPRIS P1 TSL 3 BASIC13.8□□□□□ -0.2
TFF3Q07654 AC079316.1-201ENST00000548397 411 ntBASIC13.8□□□□□ -0.2
TFF3Q07654 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC13.8□□□□□ -0.2
TFF3Q07654 ANXA2R-202ENST00000616064 1265 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
TFF3Q07654 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
TFF3Q07654 HADH-212ENST00000638621 741 ntTSL 5 BASIC13.8□□□□□ -0.2
TFF3Q07654 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
TFF3Q07654 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
TFF3Q07654 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC13.8□□□□□ -0.2
TFF3Q07654 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC13.8□□□□□ -0.2
TFF3Q07654 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC13.8□□□□□ -0.2
TFF3Q07654 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC13.8□□□□□ -0.2
TFF3Q07654 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC13.8□□□□□ -0.2
TFF3Q07654 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
TFF3Q07654 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC13.8□□□□□ -0.2
TFF3Q07654 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC13.8□□□□□ -0.2
TFF3Q07654 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC13.8□□□□□ -0.2
TFF3Q07654 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
TFF3Q07654 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
TFF3Q07654 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
TFF3Q07654 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC13.8□□□□□ -0.2
TFF3Q07654 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC13.8□□□□□ -0.2
TFF3Q07654 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC13.8□□□□□ -0.2
TFF3Q07654 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
TFF3Q07654 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC13.79□□□□□ -0.2
TFF3Q07654 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC13.79□□□□□ -0.2
TFF3Q07654 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
TFF3Q07654 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC13.79□□□□□ -0.2
TFF3Q07654 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC13.79□□□□□ -0.2
TFF3Q07654 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
TFF3Q07654 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
TFF3Q07654 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
TFF3Q07654 HYMAI-201ENST00000635591 3347 ntBASIC13.79□□□□□ -0.2
TFF3Q07654 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC13.79□□□□□ -0.2
TFF3Q07654 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
TFF3Q07654 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
TFF3Q07654 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC13.79□□□□□ -0.2
TFF3Q07654 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC13.79□□□□□ -0.2
TFF3Q07654 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
TFF3Q07654 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC13.79□□□□□ -0.2
TFF3Q07654 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
TFF3Q07654 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC13.79□□□□□ -0.2
TFF3Q07654 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC13.79□□□□□ -0.2
TFF3Q07654 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
TFF3Q07654 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
TFF3Q07654 GTSF1-201ENST00000305879 804 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
TFF3Q07654 IFNL2-201ENST00000331982 737 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
TFF3Q07654 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
TFF3Q07654 SETD4-205ENST00000399208 1165 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
TFF3Q07654 HAUS4P1-201ENST00000406739 1145 ntBASIC13.79□□□□□ -0.2
TFF3Q07654 AC016694.1-201ENST00000434179 700 ntBASIC13.79□□□□□ -0.2
TFF3Q07654 YBX1P6-201ENST00000442962 1002 ntBASIC13.79□□□□□ -0.2
TFF3Q07654 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC13.79□□□□□ -0.2
TFF3Q07654 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC13.79□□□□□ -0.2
TFF3Q07654 ROPN1B-210ENST00000514116 1088 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
TFF3Q07654 SNHG9-201ENST00000531523 275 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
TFF3Q07654 C12orf49-204ENST00000548356 923 ntTSL 2 BASIC13.79□□□□□ -0.2
TFF3Q07654 KRT90P-201ENST00000549264 1064 ntBASIC13.79□□□□□ -0.2
TFF3Q07654 IGHV3OR16-16-201ENST00000563644 343 ntBASIC13.79□□□□□ -0.2
TFF3Q07654 DYNLRB2-205ENST00000568035 409 ntTSL 5 BASIC13.79□□□□□ -0.2
TFF3Q07654 DERL2-202ENST00000570848 657 ntTSL 5 BASIC13.79□□□□□ -0.2
TFF3Q07654 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC13.79□□□□□ -0.2
TFF3Q07654 TUBB6-213ENST00000591909 1017 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
TFF3Q07654 AC000095.1-201ENST00000603208 874 ntBASIC13.79□□□□□ -0.2
TFF3Q07654 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC13.79□□□□□ -0.2
TFF3Q07654 AC244669.2-201ENST00000612320 853 ntBASIC13.79□□□□□ -0.2
TFF3Q07654 METTL26-214ENST00000614890 801 ntTSL 3 BASIC13.79□□□□□ -0.2
TFF3Q07654 AC099795.1-202ENST00000640492 759 ntTSL 5 BASIC13.79□□□□□ -0.2
TFF3Q07654 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
TFF3Q07654 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC13.79□□□□□ -0.2
TFF3Q07654 AC134312.5-201ENST00000568031 1313 ntBASIC13.79□□□□□ -0.2
TFF3Q07654 AL596257.1-201ENST00000641463 2694 ntBASIC13.79□□□□□ -0.2
TFF3Q07654 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
TFF3Q07654 AC012531.2-201ENST00000512206 1389 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
TFF3Q07654 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
TFF3Q07654 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
TFF3Q07654 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC13.79□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 41.4 ms