Protein–RNA interactions for Protein: Q03692

COL10A1, Collagen alpha-1(X) chain, humanhuman

Predictions only

Length 680 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL10A1Q03692 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
COL10A1Q03692 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
COL10A1Q03692 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
COL10A1Q03692 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
COL10A1Q03692 ZNF84-202ENST00000392319 7020 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
COL10A1Q03692 PKN1-202ENST00000342216 2960 ntTSL 2 BASIC13.33□□□□□ -0.28
COL10A1Q03692 MIR600HG-201ENST00000449175 5984 ntBASIC13.33□□□□□ -0.28
COL10A1Q03692 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
COL10A1Q03692 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
COL10A1Q03692 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
COL10A1Q03692 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
COL10A1Q03692 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC13.33□□□□□ -0.28
COL10A1Q03692 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
COL10A1Q03692 AC092127.1-201ENST00000567093 3455 ntBASIC13.33□□□□□ -0.28
COL10A1Q03692 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
COL10A1Q03692 SHROOM2-201ENST00000380913 7447 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
COL10A1Q03692 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC13.32□□□□□ -0.28
COL10A1Q03692 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC13.32□□□□□ -0.28
COL10A1Q03692 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
COL10A1Q03692 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC13.32□□□□□ -0.28
COL10A1Q03692 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
COL10A1Q03692 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
COL10A1Q03692 PODN-202ENST00000371500 3287 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
COL10A1Q03692 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
COL10A1Q03692 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC13.32□□□□□ -0.28
COL10A1Q03692 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
COL10A1Q03692 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
COL10A1Q03692 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC13.32□□□□□ -0.28
COL10A1Q03692 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
COL10A1Q03692 AC021683.3-202ENST00000592572 4440 ntTSL 5 BASIC13.32□□□□□ -0.28
COL10A1Q03692 PSMG3-AS1-201ENST00000437621 5701 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
COL10A1Q03692 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
COL10A1Q03692 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC13.32□□□□□ -0.28
COL10A1Q03692 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
COL10A1Q03692 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
COL10A1Q03692 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC13.32□□□□□ -0.28
COL10A1Q03692 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
COL10A1Q03692 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC13.32□□□□□ -0.28
COL10A1Q03692 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC13.32□□□□□ -0.28
COL10A1Q03692 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
COL10A1Q03692 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC13.32□□□□□ -0.28
COL10A1Q03692 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
COL10A1Q03692 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC13.32□□□□□ -0.28
COL10A1Q03692 AC069262.1-201ENST00000539058 672 ntBASIC13.32□□□□□ -0.28
COL10A1Q03692 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
COL10A1Q03692 AC004449.1-201ENST00000564240 433 ntBASIC13.32□□□□□ -0.28
COL10A1Q03692 MIR4313-201ENST00000580760 101 ntBASIC13.32□□□□□ -0.28
COL10A1Q03692 AL133215.2-201ENST00000609242 977 ntBASIC13.32□□□□□ -0.28
COL10A1Q03692 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
COL10A1Q03692 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC13.32□□□□□ -0.28
COL10A1Q03692 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC13.32□□□□□ -0.28
COL10A1Q03692 OPA1-208ENST00000392438 6340 ntAPPRIS ALT1 TSL 1 (best) BASIC13.32□□□□□ -0.28
COL10A1Q03692 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
COL10A1Q03692 AC104581.4-201ENST00000623126 3052 ntBASIC13.32□□□□□ -0.28
COL10A1Q03692 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
COL10A1Q03692 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
COL10A1Q03692 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC13.32□□□□□ -0.28
COL10A1Q03692 E2F3-201ENST00000346618 4749 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
COL10A1Q03692 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
COL10A1Q03692 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC13.32□□□□□ -0.28
COL10A1Q03692 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
COL10A1Q03692 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
COL10A1Q03692 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
COL10A1Q03692 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
COL10A1Q03692 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
COL10A1Q03692 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC13.31□□□□□ -0.28
COL10A1Q03692 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC13.31□□□□□ -0.28
COL10A1Q03692 TP53INP1-201ENST00000342697 5638 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
COL10A1Q03692 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
COL10A1Q03692 TRIM45-201ENST00000256649 3515 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
COL10A1Q03692 CEP170B-203ENST00000453495 6813 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
COL10A1Q03692 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
COL10A1Q03692 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC13.31□□□□□ -0.28
COL10A1Q03692 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
COL10A1Q03692 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
COL10A1Q03692 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
COL10A1Q03692 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
COL10A1Q03692 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
COL10A1Q03692 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
COL10A1Q03692 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
COL10A1Q03692 ILF3-AS1-201ENST00000591501 1983 ntBASIC13.31□□□□□ -0.28
COL10A1Q03692 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
COL10A1Q03692 MVK-207ENST00000539575 2747 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
COL10A1Q03692 TBK1-201ENST00000331710 3256 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
COL10A1Q03692 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
COL10A1Q03692 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
COL10A1Q03692 IMPDH1P4-201ENST00000445028 1534 ntBASIC13.31□□□□□ -0.28
COL10A1Q03692 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC13.31□□□□□ -0.28
COL10A1Q03692 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
COL10A1Q03692 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
COL10A1Q03692 AL139400.1-201ENST00000366220 510 ntBASIC13.31□□□□□ -0.28
COL10A1Q03692 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
COL10A1Q03692 RAC2-202ENST00000401529 569 ntTSL 4 BASIC13.31□□□□□ -0.28
COL10A1Q03692 AZGP1P1-201ENST00000411909 902 ntBASIC13.31□□□□□ -0.28
COL10A1Q03692 VPS29-207ENST00000549970 818 ntTSL 3 BASIC13.31□□□□□ -0.28
COL10A1Q03692 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC13.31□□□□□ -0.28
COL10A1Q03692 AL589739.1-201ENST00000607720 493 ntBASIC13.31□□□□□ -0.28
COL10A1Q03692 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
COL10A1Q03692 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC13.31□□□□□ -0.28
COL10A1Q03692 TKT-202ENST00000423516 2075 ntTSL 2 BASIC13.31□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 43.8 ms