Protein–RNA interactions for Protein: P61619

SEC61A1, Protein transport protein Sec61 subunit alpha isoform 1, humanhuman

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1P61619 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC13.87□□□□□ -0.19
SEC61A1P61619 TPD52L2-202ENST00000346249 2297 ntAPPRIS ALT1 TSL 1 (best) BASIC13.87□□□□□ -0.19
SEC61A1P61619 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
SEC61A1P61619 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC13.87□□□□□ -0.19
SEC61A1P61619 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
SEC61A1P61619 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
SEC61A1P61619 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
SEC61A1P61619 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
SEC61A1P61619 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
SEC61A1P61619 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
SEC61A1P61619 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
SEC61A1P61619 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
SEC61A1P61619 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
SEC61A1P61619 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
SEC61A1P61619 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC13.87□□□□□ -0.19
SEC61A1P61619 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
SEC61A1P61619 TSEN15P1-201ENST00000423257 515 ntBASIC13.87□□□□□ -0.19
SEC61A1P61619 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC13.87□□□□□ -0.19
SEC61A1P61619 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
SEC61A1P61619 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC13.87□□□□□ -0.19
SEC61A1P61619 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC13.87□□□□□ -0.19
SEC61A1P61619 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
SEC61A1P61619 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
SEC61A1P61619 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC13.87□□□□□ -0.19
SEC61A1P61619 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC13.87□□□□□ -0.19
SEC61A1P61619 SIGLEC29P-201ENST00000599873 1114 ntBASIC13.87□□□□□ -0.19
SEC61A1P61619 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC13.87□□□□□ -0.19
SEC61A1P61619 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC13.87□□□□□ -0.19
SEC61A1P61619 AC093028.1-201ENST00000622998 982 ntBASIC13.87□□□□□ -0.19
SEC61A1P61619 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
SEC61A1P61619 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
SEC61A1P61619 GLIDR-202ENST00000625350 2588 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
SEC61A1P61619 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
SEC61A1P61619 SLC4A7-210ENST00000440156 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
SEC61A1P61619 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
SEC61A1P61619 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
SEC61A1P61619 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
SEC61A1P61619 STAMBPL1-204ENST00000371927 4184 ntTSL 2 BASIC13.87□□□□□ -0.19
SEC61A1P61619 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC13.87□□□□□ -0.19
SEC61A1P61619 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
SEC61A1P61619 FGD5-206ENST00000543601 5768 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
SEC61A1P61619 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
SEC61A1P61619 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC13.87□□□□□ -0.19
SEC61A1P61619 LINC01144-201ENST00000626198 1710 ntBASIC13.87□□□□□ -0.19
SEC61A1P61619 KIAA1468-201ENST00000256858 5579 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
SEC61A1P61619 IFNAR1-201ENST00000270139 6139 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
SEC61A1P61619 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
SEC61A1P61619 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
SEC61A1P61619 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC13.87□□□□□ -0.19
SEC61A1P61619 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC13.87□□□□□ -0.19
SEC61A1P61619 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
SEC61A1P61619 ATXN10-202ENST00000381061 3135 ntTSL 2 BASIC13.86□□□□□ -0.19
SEC61A1P61619 MICAL3-206ENST00000441493 9445 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
SEC61A1P61619 ATP2B3-204ENST00000370186 6742 ntTSL 5 BASIC13.86□□□□□ -0.19
SEC61A1P61619 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC13.86□□□□□ -0.19
SEC61A1P61619 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
SEC61A1P61619 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
SEC61A1P61619 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC13.86□□□□□ -0.19
SEC61A1P61619 HOXB4-201ENST00000332503 3757 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
SEC61A1P61619 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC13.86□□□□□ -0.19
SEC61A1P61619 AL627223.1-201ENST00000416693 442 ntBASIC13.86□□□□□ -0.19
SEC61A1P61619 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
SEC61A1P61619 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC13.86□□□□□ -0.19
SEC61A1P61619 WDR53-204ENST00000433160 887 ntTSL 5 BASIC13.86□□□□□ -0.19
SEC61A1P61619 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC13.86□□□□□ -0.19
SEC61A1P61619 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
SEC61A1P61619 AL592309.1-201ENST00000443127 649 ntBASIC13.86□□□□□ -0.19
SEC61A1P61619 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC13.86□□□□□ -0.19
SEC61A1P61619 AC023141.5-201ENST00000458585 616 ntBASIC13.86□□□□□ -0.19
SEC61A1P61619 RN7SL589P-201ENST00000481268 310 ntBASIC13.86□□□□□ -0.19
SEC61A1P61619 KCNT1-207ENST00000487664 3845 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
SEC61A1P61619 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC13.86□□□□□ -0.19
SEC61A1P61619 FAM86C2P-203ENST00000528684 1004 ntBASIC13.86□□□□□ -0.19
SEC61A1P61619 RPS15-207ENST00000591032 550 ntTSL 3 BASIC13.86□□□□□ -0.19
SEC61A1P61619 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
SEC61A1P61619 ZNF586-201ENST00000391702 2265 ntTSL 2 BASIC13.86□□□□□ -0.19
SEC61A1P61619 TMBIM7P-203ENST00000641617 1718 ntBASIC13.86□□□□□ -0.19
SEC61A1P61619 SLC35E2B-203ENST00000611123 5948 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
SEC61A1P61619 FGD5-AS1-202ENST00000424349 3792 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
SEC61A1P61619 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
SEC61A1P61619 SPTLC2-201ENST00000216484 8170 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
SEC61A1P61619 FAM163A-201ENST00000341785 2909 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
SEC61A1P61619 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC13.86□□□□□ -0.19
SEC61A1P61619 GATA3-202ENST00000379328 3078 ntAPPRIS ALT1 TSL 1 (best) BASIC13.86□□□□□ -0.19
SEC61A1P61619 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
SEC61A1P61619 ARHGEF28-202ENST00000296799 4424 ntAPPRIS ALT2 TSL 2 BASIC13.86□□□□□ -0.19
SEC61A1P61619 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC13.86□□□□□ -0.19
SEC61A1P61619 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
SEC61A1P61619 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC13.86□□□□□ -0.19
SEC61A1P61619 GPAA1P2-202ENST00000606848 1787 ntBASIC13.86□□□□□ -0.19
SEC61A1P61619 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC13.86□□□□□ -0.19
SEC61A1P61619 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC13.86□□□□□ -0.19
SEC61A1P61619 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC13.86□□□□□ -0.19
SEC61A1P61619 OR2I1P-209ENST00000641730 5365 ntBASIC13.86□□□□□ -0.19
SEC61A1P61619 PCDHGB1-202ENST00000611598 2592 ntAPPRIS ALT2 BASIC13.85□□□□□ -0.19
SEC61A1P61619 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
SEC61A1P61619 SLC39A6-202ENST00000440549 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
SEC61A1P61619 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
SEC61A1P61619 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
SEC61A1P61619 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 31 ms