Protein–RNA interactions for Protein: P55286

CDH8, Cadherin-8, humanhuman

Predictions only

Length 799 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8P55286 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC16.74■□□□□ 0.27
CDH8P55286 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
CDH8P55286 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC16.74■□□□□ 0.27
CDH8P55286 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CDH8P55286 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CDH8P55286 TK1-203ENST00000588734 1681 ntTSL 2 BASIC16.74■□□□□ 0.27
CDH8P55286 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC16.74■□□□□ 0.27
CDH8P55286 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CDH8P55286 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CDH8P55286 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC16.74■□□□□ 0.27
CDH8P55286 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
CDH8P55286 AC020658.6-201ENST00000623564 1870 ntBASIC16.73■□□□□ 0.27
CDH8P55286 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
CDH8P55286 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CDH8P55286 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
CDH8P55286 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC16.73■□□□□ 0.27
CDH8P55286 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC16.73■□□□□ 0.27
CDH8P55286 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC16.73■□□□□ 0.27
CDH8P55286 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC16.73■□□□□ 0.27
CDH8P55286 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC16.73■□□□□ 0.27
CDH8P55286 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC16.73■□□□□ 0.27
CDH8P55286 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC16.73■□□□□ 0.27
CDH8P55286 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC16.73■□□□□ 0.27
CDH8P55286 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CDH8P55286 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC16.73■□□□□ 0.27
CDH8P55286 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
CDH8P55286 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CDH8P55286 NME3-201ENST00000219302 1069 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CDH8P55286 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CDH8P55286 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CDH8P55286 PKIG-203ENST00000372887 769 ntTSL 3 BASIC16.73■□□□□ 0.27
CDH8P55286 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC16.73■□□□□ 0.27
CDH8P55286 CRB3P1-201ENST00000449338 276 ntBASIC16.73■□□□□ 0.27
CDH8P55286 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC16.73■□□□□ 0.27
CDH8P55286 RHOA-206ENST00000454011 889 ntTSL 2 BASIC16.73■□□□□ 0.27
CDH8P55286 RN7SL399P-201ENST00000471648 279 ntBASIC16.73■□□□□ 0.27
CDH8P55286 AC055876.2-201ENST00000531834 546 ntBASIC16.73■□□□□ 0.27
CDH8P55286 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC16.73■□□□□ 0.27
CDH8P55286 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC16.73■□□□□ 0.27
CDH8P55286 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CDH8P55286 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CDH8P55286 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC16.73■□□□□ 0.27
CDH8P55286 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC16.73■□□□□ 0.27
CDH8P55286 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
CDH8P55286 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
CDH8P55286 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC16.73■□□□□ 0.27
CDH8P55286 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
CDH8P55286 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
CDH8P55286 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC16.73■□□□□ 0.27
CDH8P55286 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
CDH8P55286 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
CDH8P55286 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC16.72■□□□□ 0.27
CDH8P55286 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC16.72■□□□□ 0.27
CDH8P55286 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CDH8P55286 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC16.72■□□□□ 0.27
CDH8P55286 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CDH8P55286 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
CDH8P55286 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC16.72■□□□□ 0.27
CDH8P55286 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CDH8P55286 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CDH8P55286 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
CDH8P55286 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC16.72■□□□□ 0.27
CDH8P55286 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC16.72■□□□□ 0.27
CDH8P55286 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC16.72■□□□□ 0.27
CDH8P55286 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC16.72■□□□□ 0.27
CDH8P55286 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC16.72■□□□□ 0.27
CDH8P55286 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC16.72■□□□□ 0.27
CDH8P55286 SPDYE22P-201ENST00000582158 798 ntBASIC16.72■□□□□ 0.27
CDH8P55286 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC16.72■□□□□ 0.27
CDH8P55286 AL662799.1-202ENST00000614205 422 ntBASIC16.72■□□□□ 0.27
CDH8P55286 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CDH8P55286 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
CDH8P55286 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
CDH8P55286 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CDH8P55286 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
CDH8P55286 RERG-209ENST00000546331 1383 ntTSL 2 BASIC16.72■□□□□ 0.27
CDH8P55286 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC16.72■□□□□ 0.27
CDH8P55286 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CDH8P55286 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
CDH8P55286 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC16.72■□□□□ 0.27
CDH8P55286 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
CDH8P55286 LCK-206ENST00000373564 2137 ntTSL 5 BASIC16.72■□□□□ 0.27
CDH8P55286 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CDH8P55286 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CDH8P55286 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC16.72■□□□□ 0.27
CDH8P55286 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
CDH8P55286 GSN-206ENST00000394353 2311 ntTSL 2 BASIC16.71■□□□□ 0.27
CDH8P55286 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC16.71■□□□□ 0.27
CDH8P55286 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
CDH8P55286 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC16.71■□□□□ 0.27
CDH8P55286 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
CDH8P55286 MFF-204ENST00000353339 2186 ntTSL 5 BASIC16.71■□□□□ 0.27
CDH8P55286 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
CDH8P55286 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CDH8P55286 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
CDH8P55286 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
CDH8P55286 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
CDH8P55286 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC16.71■□□□□ 0.27
CDH8P55286 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC16.71■□□□□ 0.27
CDH8P55286 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 36.7 ms