Protein–RNA interactions for Protein: P54760

EPHB4, Ephrin type-B receptor 4, humanhuman

Predictions only

Length 987 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB4P54760 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
EPHB4P54760 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
EPHB4P54760 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
EPHB4P54760 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
EPHB4P54760 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC17.69■□□□□ 0.42
EPHB4P54760 AC006277.1-201ENST00000624348 1610 ntBASIC17.69■□□□□ 0.42
EPHB4P54760 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC17.69■□□□□ 0.42
EPHB4P54760 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
EPHB4P54760 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
EPHB4P54760 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
EPHB4P54760 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
EPHB4P54760 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
EPHB4P54760 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
EPHB4P54760 APOC3-202ENST00000375345 604 ntTSL 5 BASIC17.69■□□□□ 0.42
EPHB4P54760 TSPAN32-204ENST00000381121 999 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
EPHB4P54760 ELK2AP-201ENST00000392510 1007 ntBASIC17.69■□□□□ 0.42
EPHB4P54760 POLR2F-208ENST00000470701 584 ntTSL 3 BASIC17.69■□□□□ 0.42
EPHB4P54760 HNRNPA1P13-201ENST00000510646 963 ntBASIC17.69■□□□□ 0.42
EPHB4P54760 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC17.69■□□□□ 0.42
EPHB4P54760 AC074044.1-201ENST00000609673 707 ntBASIC17.69■□□□□ 0.42
EPHB4P54760 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
EPHB4P54760 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
EPHB4P54760 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
EPHB4P54760 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
EPHB4P54760 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
EPHB4P54760 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC17.69■□□□□ 0.42
EPHB4P54760 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
EPHB4P54760 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
EPHB4P54760 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
EPHB4P54760 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
EPHB4P54760 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
EPHB4P54760 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
EPHB4P54760 SLC25A19-202ENST00000375261 1486 ntTSL 5 BASIC17.69■□□□□ 0.42
EPHB4P54760 PPP1R1B-205ENST00000579000 1466 ntTSL 5 BASIC17.69■□□□□ 0.42
EPHB4P54760 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
EPHB4P54760 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC17.69■□□□□ 0.42
EPHB4P54760 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC17.69■□□□□ 0.42
EPHB4P54760 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC17.68■□□□□ 0.42
EPHB4P54760 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
EPHB4P54760 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
EPHB4P54760 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
EPHB4P54760 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
EPHB4P54760 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC17.68■□□□□ 0.42
EPHB4P54760 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC17.68■□□□□ 0.42
EPHB4P54760 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
EPHB4P54760 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
EPHB4P54760 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
EPHB4P54760 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
EPHB4P54760 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC17.68■□□□□ 0.42
EPHB4P54760 MOGAT3-202ENST00000379423 933 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
EPHB4P54760 AC092506.1-202ENST00000401022 528 ntBASIC17.68■□□□□ 0.42
EPHB4P54760 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
EPHB4P54760 AC093904.2-201ENST00000495580 418 ntTSL 3 BASIC17.68■□□□□ 0.42
EPHB4P54760 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC17.68■□□□□ 0.42
EPHB4P54760 TIMM17BP1-201ENST00000545713 516 ntBASIC17.68■□□□□ 0.42
EPHB4P54760 RHOQP1-201ENST00000555758 579 ntBASIC17.68■□□□□ 0.42
EPHB4P54760 EMC4-209ENST00000559421 497 ntTSL 2 BASIC17.68■□□□□ 0.42
EPHB4P54760 OCEL1-213ENST00000601529 942 ntTSL 3 BASIC17.68■□□□□ 0.42
EPHB4P54760 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
EPHB4P54760 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
EPHB4P54760 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC17.68■□□□□ 0.42
EPHB4P54760 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
EPHB4P54760 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
EPHB4P54760 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
EPHB4P54760 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
EPHB4P54760 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
EPHB4P54760 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
EPHB4P54760 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC17.68■□□□□ 0.42
EPHB4P54760 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC17.68■□□□□ 0.42
EPHB4P54760 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC17.68■□□□□ 0.42
EPHB4P54760 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
EPHB4P54760 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
EPHB4P54760 DHPS-201ENST00000210060 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
EPHB4P54760 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
EPHB4P54760 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
EPHB4P54760 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
EPHB4P54760 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
EPHB4P54760 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC17.67■□□□□ 0.42
EPHB4P54760 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
EPHB4P54760 KRT8P39-201ENST00000396270 1433 ntBASIC17.67■□□□□ 0.42
EPHB4P54760 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
EPHB4P54760 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
EPHB4P54760 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
EPHB4P54760 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC17.67■□□□□ 0.42
EPHB4P54760 UPK3A-201ENST00000216211 1051 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
EPHB4P54760 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
EPHB4P54760 OR10H1-201ENST00000334920 1124 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
EPHB4P54760 SPAG11B-203ENST00000359758 612 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
EPHB4P54760 LCE1E-202ENST00000368771 575 ntAPPRIS P2 TSL 3 BASIC17.67■□□□□ 0.42
EPHB4P54760 MIR1247-201ENST00000408206 136 ntBASIC17.67■□□□□ 0.42
EPHB4P54760 VMO1-203ENST00000416307 712 ntTSL 2 BASIC17.67■□□□□ 0.42
EPHB4P54760 AC007731.4-201ENST00000420225 652 ntTSL 2 BASIC17.67■□□□□ 0.42
EPHB4P54760 BCRP2-202ENST00000447763 634 ntBASIC17.67■□□□□ 0.42
EPHB4P54760 BCRP6-201ENST00000510112 632 ntBASIC17.67■□□□□ 0.42
EPHB4P54760 BCRP7-201ENST00000511549 544 ntBASIC17.67■□□□□ 0.42
EPHB4P54760 SPDYE16-201ENST00000515340 858 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
EPHB4P54760 AP002748.3-205ENST00000525142 567 ntTSL 3 BASIC17.67■□□□□ 0.42
EPHB4P54760 AP002748.3-203ENST00000533502 581 ntTSL 3 BASIC17.67■□□□□ 0.42
EPHB4P54760 AC010491.1-202ENST00000567048 528 ntTSL 2 BASIC17.67■□□□□ 0.42
EPHB4P54760 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 73.6 ms