Protein–RNA interactions for Protein: P54277

PMS1, PMS1 protein homolog 1, humanhuman

Known RBP Predictions only

Length 932 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1P54277 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
PMS1P54277 ABCB8-221ENST00000498578 2350 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
PMS1P54277 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PMS1P54277 AC084364.1-201ENST00000551967 1556 ntBASIC17.29■□□□□ 0.36
PMS1P54277 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PMS1P54277 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PMS1P54277 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
PMS1P54277 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
PMS1P54277 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PMS1P54277 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
PMS1P54277 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
PMS1P54277 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC17.29■□□□□ 0.36
PMS1P54277 DAD1-205ENST00000543337 501 ntTSL 3 BASIC17.29■□□□□ 0.36
PMS1P54277 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC17.29■□□□□ 0.36
PMS1P54277 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC17.29■□□□□ 0.36
PMS1P54277 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC17.29■□□□□ 0.36
PMS1P54277 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
PMS1P54277 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC17.29■□□□□ 0.36
PMS1P54277 COQ4-205ENST00000609948 956 ntTSL 2 BASIC17.29■□□□□ 0.36
PMS1P54277 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
PMS1P54277 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PMS1P54277 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
PMS1P54277 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
PMS1P54277 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
PMS1P54277 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
PMS1P54277 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PMS1P54277 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
PMS1P54277 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PMS1P54277 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
PMS1P54277 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
PMS1P54277 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC17.29■□□□□ 0.36
PMS1P54277 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PMS1P54277 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC17.28■□□□□ 0.36
PMS1P54277 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC17.28■□□□□ 0.36
PMS1P54277 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC17.28■□□□□ 0.36
PMS1P54277 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PMS1P54277 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
PMS1P54277 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC17.28■□□□□ 0.36
PMS1P54277 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
PMS1P54277 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC17.28■□□□□ 0.36
PMS1P54277 ZNF777-201ENST00000247930 3233 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PMS1P54277 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
PMS1P54277 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PMS1P54277 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
PMS1P54277 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PMS1P54277 NME2-201ENST00000393183 568 ntTSL 2 BASIC17.28■□□□□ 0.36
PMS1P54277 SPDYE7P-202ENST00000420373 878 ntBASIC17.28■□□□□ 0.36
PMS1P54277 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC17.28■□□□□ 0.36
PMS1P54277 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
PMS1P54277 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC17.28■□□□□ 0.36
PMS1P54277 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC17.28■□□□□ 0.36
PMS1P54277 CALM1-205ENST00000553542 877 ntTSL 5 BASIC17.28■□□□□ 0.36
PMS1P54277 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC17.28■□□□□ 0.36
PMS1P54277 CMC2-214ENST00000565925 640 ntTSL 5 BASIC17.28■□□□□ 0.36
PMS1P54277 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC17.28■□□□□ 0.36
PMS1P54277 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
PMS1P54277 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
PMS1P54277 CRHR2-208ENST00000506074 3109 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
PMS1P54277 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PMS1P54277 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
PMS1P54277 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PMS1P54277 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
PMS1P54277 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PMS1P54277 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PMS1P54277 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
PMS1P54277 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC17.28■□□□□ 0.36
PMS1P54277 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PMS1P54277 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
PMS1P54277 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
PMS1P54277 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PMS1P54277 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
PMS1P54277 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC17.27■□□□□ 0.36
PMS1P54277 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC17.27■□□□□ 0.36
PMS1P54277 AC005264.1-201ENST00000587587 2319 ntTSL 2 BASIC17.27■□□□□ 0.36
PMS1P54277 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC17.27■□□□□ 0.36
PMS1P54277 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
PMS1P54277 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
PMS1P54277 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
PMS1P54277 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC17.27■□□□□ 0.36
PMS1P54277 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
PMS1P54277 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
PMS1P54277 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC17.27■□□□□ 0.36
PMS1P54277 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC17.27■□□□□ 0.36
PMS1P54277 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
PMS1P54277 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
PMS1P54277 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
PMS1P54277 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
PMS1P54277 MARS-233ENST00000628866 2583 ntTSL 5 BASIC17.27■□□□□ 0.36
PMS1P54277 PCNX3-201ENST00000355703 7105 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
PMS1P54277 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
PMS1P54277 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC17.27■□□□□ 0.36
PMS1P54277 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
PMS1P54277 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC17.27■□□□□ 0.36
PMS1P54277 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC17.27■□□□□ 0.36
PMS1P54277 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC17.27■□□□□ 0.36
PMS1P54277 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC17.27■□□□□ 0.36
PMS1P54277 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC17.27■□□□□ 0.36
PMS1P54277 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
PMS1P54277 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC17.27■□□□□ 0.36
PMS1P54277 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC17.27■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 33 ms