Protein–RNA interactions for Protein: P51788

CLCN2, Chloride channel protein 2, humanhuman

Predictions only

Length 898 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN2P51788 PGR-210ENST00000619228 3038 ntTSL 5 BASIC15.32■□□□□ 0.04
CLCN2P51788 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CLCN2P51788 ZDHHC3-201ENST00000296127 3101 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CLCN2P51788 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
CLCN2P51788 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
CLCN2P51788 YTHDC1-202ENST00000355665 3244 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
CLCN2P51788 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC15.32■□□□□ 0.04
CLCN2P51788 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CLCN2P51788 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC15.31■□□□□ 0.04
CLCN2P51788 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC15.31■□□□□ 0.04
CLCN2P51788 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC15.31■□□□□ 0.04
CLCN2P51788 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC15.31■□□□□ 0.04
CLCN2P51788 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CLCN2P51788 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CLCN2P51788 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CLCN2P51788 OS9-204ENST00000389146 2091 ntTSL 2 BASIC15.31■□□□□ 0.04
CLCN2P51788 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CLCN2P51788 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CLCN2P51788 CYB561-203ENST00000392976 3151 ntAPPRIS P1 TSL 3 BASIC15.31■□□□□ 0.04
CLCN2P51788 JPH4-201ENST00000356300 4278 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
CLCN2P51788 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CLCN2P51788 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CLCN2P51788 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC15.31■□□□□ 0.04
CLCN2P51788 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
CLCN2P51788 AL139082.1-201ENST00000613982 3433 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CLCN2P51788 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CLCN2P51788 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
CLCN2P51788 NYAP1-201ENST00000300179 3581 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
CLCN2P51788 HNRNPFP1-201ENST00000391730 1133 ntBASIC15.31■□□□□ 0.04
CLCN2P51788 PNMT-202ENST00000394246 821 ntTSL 2 BASIC15.31■□□□□ 0.04
CLCN2P51788 RPL30-202ENST00000396070 440 ntTSL 2 BASIC15.31■□□□□ 0.04
CLCN2P51788 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC15.31■□□□□ 0.04
CLCN2P51788 PP14571-201ENST00000404327 934 ntTSL 2 BASIC15.31■□□□□ 0.04
CLCN2P51788 VMO1-203ENST00000416307 712 ntTSL 2 BASIC15.31■□□□□ 0.04
CLCN2P51788 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC15.31■□□□□ 0.04
CLCN2P51788 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
CLCN2P51788 AL645939.2-201ENST00000427340 991 ntBASIC15.31■□□□□ 0.04
CLCN2P51788 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC15.31■□□□□ 0.04
CLCN2P51788 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC15.31■□□□□ 0.04
CLCN2P51788 LSM12-202ENST00000585388 942 ntTSL 3 BASIC15.31■□□□□ 0.04
CLCN2P51788 SSH2-211ENST00000590153 570 ntTSL 4 BASIC15.31■□□□□ 0.04
CLCN2P51788 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC15.31■□□□□ 0.04
CLCN2P51788 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC15.31■□□□□ 0.04
CLCN2P51788 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC15.31■□□□□ 0.04
CLCN2P51788 ZNF18-201ENST00000322748 2767 ntAPPRIS P3 TSL 2 BASIC15.31■□□□□ 0.04
CLCN2P51788 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
CLCN2P51788 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CLCN2P51788 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC15.31■□□□□ 0.04
CLCN2P51788 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CLCN2P51788 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CLCN2P51788 ARPP19-202ENST00000561650 3245 ntTSL 2 BASIC15.31■□□□□ 0.04
CLCN2P51788 CNOT9-208ENST00000542068 3259 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
CLCN2P51788 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
CLCN2P51788 AC073439.1-201ENST00000624121 1774 ntBASIC15.31■□□□□ 0.04
CLCN2P51788 U82695.1-201ENST00000635752 1889 ntBASIC15.31■□□□□ 0.04
CLCN2P51788 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
CLCN2P51788 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CLCN2P51788 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CLCN2P51788 AGBL3-202ENST00000435976 2495 ntTSL 5 BASIC15.31■□□□□ 0.04
CLCN2P51788 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
CLCN2P51788 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CLCN2P51788 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
CLCN2P51788 BCAR1-204ENST00000418647 3387 ntAPPRIS ALT2 TSL 2 BASIC15.3■□□□□ 0.04
CLCN2P51788 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CLCN2P51788 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
CLCN2P51788 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC15.3■□□□□ 0.04
CLCN2P51788 GAP43-201ENST00000305124 1691 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CLCN2P51788 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CLCN2P51788 TAF6-201ENST00000344095 2727 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CLCN2P51788 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CLCN2P51788 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC15.3■□□□□ 0.04
CLCN2P51788 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC15.3■□□□□ 0.04
CLCN2P51788 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CLCN2P51788 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC15.3■□□□□ 0.04
CLCN2P51788 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC15.3■□□□□ 0.04
CLCN2P51788 PRSS30P-203ENST00000476276 2855 ntTSL 2 BASIC15.3■□□□□ 0.04
CLCN2P51788 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CLCN2P51788 AC109322.1-201ENST00000524499 1264 ntBASIC15.3■□□□□ 0.04
CLCN2P51788 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CLCN2P51788 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CLCN2P51788 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC15.3■□□□□ 0.04
CLCN2P51788 WASH2P-202ENST00000538033 2800 ntTSL 2 BASIC15.3■□□□□ 0.04
CLCN2P51788 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC15.3■□□□□ 0.04
CLCN2P51788 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC15.3■□□□□ 0.04
CLCN2P51788 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CLCN2P51788 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC15.3■□□□□ 0.04
CLCN2P51788 NAA60-229ENST00000575076 2531 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CLCN2P51788 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC15.3■□□□□ 0.04
CLCN2P51788 AC093028.1-201ENST00000622998 982 ntBASIC15.3■□□□□ 0.04
CLCN2P51788 LINC00552-201ENST00000625151 2579 ntBASIC15.3■□□□□ 0.04
CLCN2P51788 ELMSAN1-201ENST00000286523 8091 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
CLCN2P51788 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC15.3■□□□□ 0.04
CLCN2P51788 SLC4A7-210ENST00000440156 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
CLCN2P51788 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
CLCN2P51788 GRID2IP-202ENST00000452113 3428 ntTSL 5 BASIC15.3■□□□□ 0.04
CLCN2P51788 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC15.3■□□□□ 0.04
CLCN2P51788 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CLCN2P51788 CD6-201ENST00000313421 3252 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
CLCN2P51788 SLC35A2-204ENST00000376521 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CLCN2P51788 SPOCK3-210ENST00000506886 2947 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 49.3 ms