Protein–RNA interactions for Protein: P48230

TM4SF4, Transmembrane 4 L6 family member 4, humanhuman

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF4P48230 STYXL1-201ENST00000248600 1415 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TM4SF4P48230 SCGN-203ENST00000612225 1402 ntTSL 5 BASIC17.54■□□□□ 0.4
TM4SF4P48230 LINC01667-202ENST00000623919 1422 ntTSL 5 BASIC17.54■□□□□ 0.4
TM4SF4P48230 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC17.54■□□□□ 0.4
TM4SF4P48230 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
TM4SF4P48230 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
TM4SF4P48230 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC17.53■□□□□ 0.4
TM4SF4P48230 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
TM4SF4P48230 MEF2C-AS1-210ENST00000514011 1754 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
TM4SF4P48230 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TM4SF4P48230 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TM4SF4P48230 PCOLCE-201ENST00000223061 1702 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TM4SF4P48230 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TM4SF4P48230 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
TM4SF4P48230 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC17.53■□□□□ 0.4
TM4SF4P48230 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TM4SF4P48230 PLA1A-204ENST00000488919 1456 ntTSL 2 BASIC17.53■□□□□ 0.4
TM4SF4P48230 CRB3-201ENST00000308243 631 ntAPPRIS ALT2 TSL 2 BASIC17.53■□□□□ 0.4
TM4SF4P48230 MAP2K3-201ENST00000316920 1246 ntTSL 5 BASIC17.53■□□□□ 0.4
TM4SF4P48230 TEX33-202ENST00000402860 986 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
TM4SF4P48230 SERF2-206ENST00000409291 807 ntTSL 3 BASIC17.53■□□□□ 0.4
TM4SF4P48230 AL139339.1-201ENST00000411906 657 ntTSL 2 BASIC17.53■□□□□ 0.4
TM4SF4P48230 AL356056.1-201ENST00000437899 369 ntTSL 5 BASIC17.53■□□□□ 0.4
TM4SF4P48230 VDAC1P1-201ENST00000439229 848 ntBASIC17.53■□□□□ 0.4
TM4SF4P48230 AC092800.1-201ENST00000449492 579 ntTSL 2 BASIC17.53■□□□□ 0.4
TM4SF4P48230 AL157792.1-201ENST00000488281 530 ntBASIC17.53■□□□□ 0.4
TM4SF4P48230 FXYD2-205ENST00000528014 672 ntAPPRIS P1 TSL 3 BASIC17.53■□□□□ 0.4
TM4SF4P48230 STUB1-204ENST00000564370 875 ntTSL 2 BASIC17.53■□□□□ 0.4
TM4SF4P48230 TMEM231-206ENST00000565067 1078 ntTSL 5 BASIC17.53■□□□□ 0.4
TM4SF4P48230 DUX4L47-201ENST00000566374 394 ntBASIC17.53■□□□□ 0.4
TM4SF4P48230 HS3ST3A1-202ENST00000578576 750 ntTSL 3 BASIC17.53■□□□□ 0.4
TM4SF4P48230 AP000229.1-202ENST00000609365 559 ntTSL 4 BASIC17.53■□□□□ 0.4
TM4SF4P48230 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
TM4SF4P48230 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
TM4SF4P48230 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TM4SF4P48230 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TM4SF4P48230 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC17.53■□□□□ 0.4
TM4SF4P48230 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TM4SF4P48230 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC17.53■□□□□ 0.4
TM4SF4P48230 AC055811.4-201ENST00000624039 1754 ntBASIC17.53■□□□□ 0.4
TM4SF4P48230 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
TM4SF4P48230 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TM4SF4P48230 ALPL-207ENST00000540617 2131 ntAPPRIS ALT2 TSL 2 BASIC17.53■□□□□ 0.4
TM4SF4P48230 CCDC51-202ENST00000412398 1385 ntTSL 2 BASIC17.53■□□□□ 0.4
TM4SF4P48230 TOB1-AS1-201ENST00000416263 1351 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
TM4SF4P48230 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC17.52■□□□□ 0.4
TM4SF4P48230 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
TM4SF4P48230 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
TM4SF4P48230 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
TM4SF4P48230 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
TM4SF4P48230 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
TM4SF4P48230 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
TM4SF4P48230 HFE-203ENST00000336625 804 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
TM4SF4P48230 AC239868.1-201ENST00000369385 493 ntBASIC17.52■□□□□ 0.4
TM4SF4P48230 CIDEC-202ENST00000383817 1199 ntAPPRIS ALT1 TSL 1 (best) BASIC17.52■□□□□ 0.4
TM4SF4P48230 AL606491.1-201ENST00000412797 483 ntTSL 3 BASIC17.52■□□□□ 0.4
TM4SF4P48230 MIR663AHG-201ENST00000427348 1213 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
TM4SF4P48230 AC008406.1-201ENST00000509530 541 ntTSL 3 BASIC17.52■□□□□ 0.4
TM4SF4P48230 C12orf10-207ENST00000549488 840 ntTSL 5 BASIC17.52■□□□□ 0.4
TM4SF4P48230 FOS-204ENST00000554617 796 ntTSL 2 BASIC17.52■□□□□ 0.4
TM4SF4P48230 GLIS2-AS1-201ENST00000576080 340 ntTSL 2 BASIC17.52■□□□□ 0.4
TM4SF4P48230 UPF3AP2-202ENST00000578315 730 ntTSL 5 BASIC17.52■□□□□ 0.4
TM4SF4P48230 FBXL12-202ENST00000585379 956 ntTSL 2 BASIC17.52■□□□□ 0.4
TM4SF4P48230 HIST2H2BB-202ENST00000609585 563 ntTSL 2 BASIC17.52■□□□□ 0.4
TM4SF4P48230 GHRHR-212ENST00000611037 923 ntTSL 5 BASIC17.52■□□□□ 0.4
TM4SF4P48230 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC17.52■□□□□ 0.4
TM4SF4P48230 AC020916.1-201ENST00000587762 1774 ntBASIC17.52■□□□□ 0.4
TM4SF4P48230 FAM151A-202ENST00000371304 1444 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
TM4SF4P48230 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
TM4SF4P48230 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC17.52■□□□□ 0.4
TM4SF4P48230 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
TM4SF4P48230 LINC00680-205ENST00000450081 1593 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
TM4SF4P48230 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.39
TM4SF4P48230 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
TM4SF4P48230 SHC1P1-201ENST00000425230 1745 ntBASIC17.52■□□□□ 0.39
TM4SF4P48230 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
TM4SF4P48230 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
TM4SF4P48230 HS1BP3-203ENST00000406618 1375 ntTSL 2 BASIC17.52■□□□□ 0.39
TM4SF4P48230 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC17.52■□□□□ 0.39
TM4SF4P48230 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
TM4SF4P48230 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC17.52■□□□□ 0.39
TM4SF4P48230 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.39
TM4SF4P48230 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC17.51■□□□□ 0.39
TM4SF4P48230 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC17.51■□□□□ 0.39
TM4SF4P48230 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
TM4SF4P48230 FAM69C-202ENST00000400291 1329 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
TM4SF4P48230 AC245100.1-201ENST00000452996 1331 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
TM4SF4P48230 KLK11-207ENST00000594768 1347 ntAPPRIS P4 TSL 1 (best) BASIC17.51■□□□□ 0.39
TM4SF4P48230 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
TM4SF4P48230 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC17.51■□□□□ 0.39
TM4SF4P48230 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC17.51■□□□□ 0.39
TM4SF4P48230 ALOX12P2-203ENST00000570921 1945 ntBASIC17.51■□□□□ 0.39
TM4SF4P48230 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TM4SF4P48230 ALKBH2-201ENST00000343075 1030 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TM4SF4P48230 OR2K2-202ENST00000374428 1038 ntBASIC17.51■□□□□ 0.39
TM4SF4P48230 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TM4SF4P48230 AK6-201ENST00000380818 1183 ntTSL 2 BASIC17.51■□□□□ 0.39
TM4SF4P48230 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
TM4SF4P48230 AC010141.1-201ENST00000411585 623 ntBASIC17.51■□□□□ 0.39
TM4SF4P48230 AC145207.1-201ENST00000415556 691 ntTSL 4 BASIC17.51■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 37.6 ms