Protein–RNA interactions for Protein: P45973

CBX5, Chromobox protein homolog 5, humanhuman

Predictions only

Length 191 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX5P45973 MARK3-202ENST00000303622 3283 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
CBX5P45973 SYDE1-201ENST00000342784 3264 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
CBX5P45973 ZFP41-203ENST00000520584 3284 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CBX5P45973 SEZ6-203ENST00000360295 4306 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
CBX5P45973 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CBX5P45973 PCDHB16-201ENST00000609684 5001 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
CBX5P45973 ATP2B3-202ENST00000349466 4280 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
CBX5P45973 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC13.65□□□□□ -0.22
CBX5P45973 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CBX5P45973 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC13.65□□□□□ -0.22
CBX5P45973 ROPN1-206ENST00000479867 2056 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
CBX5P45973 CEP131-203ENST00000450824 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
CBX5P45973 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CBX5P45973 VAPA-202ENST00000400000 6815 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CBX5P45973 NOX5-203ENST00000448182 2498 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
CBX5P45973 WSCD1-202ENST00000539421 2665 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
CBX5P45973 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
CBX5P45973 TNS2-202ENST00000314276 4944 ntAPPRIS P4 TSL 1 (best) BASIC13.65□□□□□ -0.22
CBX5P45973 PCYOX1-201ENST00000264441 2959 ntTSL 5 BASIC13.65□□□□□ -0.22
CBX5P45973 SLC6A5-202ENST00000525748 7084 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CBX5P45973 GDPGP1-202ENST00000558017 5323 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.23
CBX5P45973 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC13.64□□□□□ -0.23
CBX5P45973 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
CBX5P45973 LRIG3-201ENST00000320743 4070 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CBX5P45973 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC13.64□□□□□ -0.23
CBX5P45973 AC007292.2-201ENST00000593524 1812 ntBASIC13.64□□□□□ -0.23
CBX5P45973 AC090616.6-203ENST00000579186 1945 ntBASIC13.64□□□□□ -0.23
CBX5P45973 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
CBX5P45973 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC13.64□□□□□ -0.23
CBX5P45973 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC13.64□□□□□ -0.23
CBX5P45973 RELA-227ENST00000615805 2236 ntTSL 5 BASIC13.64□□□□□ -0.23
CBX5P45973 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CBX5P45973 RAP2B-201ENST00000323534 8351 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
CBX5P45973 PGR-210ENST00000619228 3038 ntTSL 5 BASIC13.64□□□□□ -0.23
CBX5P45973 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC13.64□□□□□ -0.23
CBX5P45973 NFKB2-204ENST00000428099 3416 ntAPPRIS ALT1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CBX5P45973 FSTL4-201ENST00000265342 5419 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
CBX5P45973 CRYBG1-201ENST00000369066 7553 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
CBX5P45973 CYP4F3-201ENST00000221307 5050 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
CBX5P45973 KCNQ4-201ENST00000347132 4099 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
CBX5P45973 PLCB1-218ENST00000629992 3095 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
CBX5P45973 UBE2D1-201ENST00000373910 2659 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CBX5P45973 COL4A1-201ENST00000375820 6532 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CBX5P45973 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
CBX5P45973 TCOF1-201ENST00000323668 4832 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
CBX5P45973 ST6GAL1-201ENST00000169298 4645 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CBX5P45973 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
CBX5P45973 KCTD3-201ENST00000259154 3931 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CBX5P45973 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
CBX5P45973 ISCU-203ENST00000431221 799 ntTSL 2 BASIC13.64□□□□□ -0.23
CBX5P45973 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CBX5P45973 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC13.64□□□□□ -0.23
CBX5P45973 AC136632.2-201ENST00000512891 861 ntBASIC13.64□□□□□ -0.23
CBX5P45973 EHF-205ENST00000527935 557 ntTSL 2 BASIC13.64□□□□□ -0.23
CBX5P45973 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
CBX5P45973 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
CBX5P45973 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC13.64□□□□□ -0.23
CBX5P45973 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC13.64□□□□□ -0.23
CBX5P45973 AC008667.4-201ENST00000607370 168 ntBASIC13.64□□□□□ -0.23
CBX5P45973 AL732292.2-201ENST00000609649 430 ntBASIC13.64□□□□□ -0.23
CBX5P45973 AC107918.4-202ENST00000641623 219 ntBASIC13.64□□□□□ -0.23
CBX5P45973 MAP2K1-201ENST00000307102 3410 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CBX5P45973 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC13.64□□□□□ -0.23
CBX5P45973 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
CBX5P45973 ACAD8-201ENST00000281182 2249 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CBX5P45973 RIOX2-202ENST00000360258 2232 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
CBX5P45973 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CBX5P45973 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
CBX5P45973 SEMA4F-202ENST00000357877 4312 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CBX5P45973 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC13.64□□□□□ -0.23
CBX5P45973 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC13.64□□□□□ -0.23
CBX5P45973 DCUN1D4-202ENST00000381441 4207 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
CBX5P45973 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC13.64□□□□□ -0.23
CBX5P45973 SPECC1L-ADORA2A-201ENST00000358654 6204 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
CBX5P45973 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
CBX5P45973 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC13.64□□□□□ -0.23
CBX5P45973 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
CBX5P45973 SNX14-202ENST00000346348 3348 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
CBX5P45973 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC13.63□□□□□ -0.23
CBX5P45973 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
CBX5P45973 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CBX5P45973 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
CBX5P45973 INO80-202ENST00000401393 5991 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CBX5P45973 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC13.63□□□□□ -0.23
CBX5P45973 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC13.63□□□□□ -0.23
CBX5P45973 ARVCF-203ENST00000406259 2871 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
CBX5P45973 LMBR1-201ENST00000353442 7997 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CBX5P45973 TBC1D9B-208ENST00000519746 2755 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
CBX5P45973 PRKCB-201ENST00000303531 7969 ntAPPRIS P4 TSL 1 (best) BASIC13.63□□□□□ -0.23
CBX5P45973 ALX4-201ENST00000329255 5750 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CBX5P45973 RER1-203ENST00000378513 3000 ntTSL 3 BASIC13.63□□□□□ -0.23
CBX5P45973 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
CBX5P45973 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CBX5P45973 AC015802.6-201ENST00000640006 5654 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
CBX5P45973 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
CBX5P45973 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
CBX5P45973 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
CBX5P45973 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
CBX5P45973 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
CBX5P45973 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC13.63□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 39.5 ms