Protein–RNA interactions for Protein: P41273

TNFSF9, Tumor necrosis factor ligand superfamily member 9, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF9P41273 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
TNFSF9P41273 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
TNFSF9P41273 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
TNFSF9P41273 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC16.93■□□□□ 0.3
TNFSF9P41273 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC16.93■□□□□ 0.3
TNFSF9P41273 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC16.93■□□□□ 0.3
TNFSF9P41273 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC16.93■□□□□ 0.3
TNFSF9P41273 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC16.93■□□□□ 0.3
TNFSF9P41273 INE1-201ENST00000456273 945 ntBASIC16.93■□□□□ 0.3
TNFSF9P41273 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC16.93■□□□□ 0.3
TNFSF9P41273 POLE2-203ENST00000553805 496 ntTSL 2 BASIC16.93■□□□□ 0.3
TNFSF9P41273 TRAPPC6A-204ENST00000588062 695 ntTSL 2 BASIC16.93■□□□□ 0.3
TNFSF9P41273 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
TNFSF9P41273 AL035252.4-201ENST00000624174 288 ntBASIC16.93■□□□□ 0.3
TNFSF9P41273 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC16.93■□□□□ 0.3
TNFSF9P41273 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
TNFSF9P41273 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC16.93■□□□□ 0.3
TNFSF9P41273 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
TNFSF9P41273 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC16.93■□□□□ 0.3
TNFSF9P41273 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
TNFSF9P41273 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
TNFSF9P41273 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
TNFSF9P41273 BID-213ENST00000615414 2236 ntTSL 5 BASIC16.93■□□□□ 0.3
TNFSF9P41273 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC16.93■□□□□ 0.3
TNFSF9P41273 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
TNFSF9P41273 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC16.93■□□□□ 0.3
TNFSF9P41273 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
TNFSF9P41273 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
TNFSF9P41273 KLRG1-201ENST00000266551 1335 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
TNFSF9P41273 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
TNFSF9P41273 CYB5R2-204ENST00000524790 1338 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
TNFSF9P41273 FBXO15-201ENST00000419743 1708 ntAPPRIS P2 TSL 2 BASIC16.93■□□□□ 0.3
TNFSF9P41273 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
TNFSF9P41273 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC16.93■□□□□ 0.3
TNFSF9P41273 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
TNFSF9P41273 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
TNFSF9P41273 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC16.93■□□□□ 0.3
TNFSF9P41273 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC16.93■□□□□ 0.3
TNFSF9P41273 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
TNFSF9P41273 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TNFSF9P41273 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
TNFSF9P41273 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
TNFSF9P41273 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TNFSF9P41273 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TNFSF9P41273 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TNFSF9P41273 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
TNFSF9P41273 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TNFSF9P41273 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC16.92■□□□□ 0.3
TNFSF9P41273 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TNFSF9P41273 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TNFSF9P41273 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TNFSF9P41273 AC098614.1-201ENST00000368528 745 ntBASIC16.92■□□□□ 0.3
TNFSF9P41273 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC16.92■□□□□ 0.3
TNFSF9P41273 TEX26-AS1-201ENST00000411835 1203 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
TNFSF9P41273 AC005034.1-201ENST00000426657 489 ntBASIC16.92■□□□□ 0.3
TNFSF9P41273 AL442647.2-201ENST00000429864 857 ntBASIC16.92■□□□□ 0.3
TNFSF9P41273 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
TNFSF9P41273 AC114730.3-201ENST00000435195 584 ntTSL 5 BASIC16.92■□□□□ 0.3
TNFSF9P41273 RN7SL752P-201ENST00000463779 287 ntBASIC16.92■□□□□ 0.3
TNFSF9P41273 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC16.92■□□□□ 0.3
TNFSF9P41273 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC16.92■□□□□ 0.3
TNFSF9P41273 SPATA8-AS1-201ENST00000558722 465 ntTSL 3 BASIC16.92■□□□□ 0.3
TNFSF9P41273 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
TNFSF9P41273 PAM16-204ENST00000571941 674 ntTSL 3 BASIC16.92■□□□□ 0.3
TNFSF9P41273 AC132938.2-201ENST00000579188 680 ntBASIC16.92■□□□□ 0.3
TNFSF9P41273 TBCB-211ENST00000589996 724 ntTSL 3 BASIC16.92■□□□□ 0.3
TNFSF9P41273 IGHV3-72-202ENST00000621503 303 ntBASIC16.92■□□□□ 0.3
TNFSF9P41273 AL358472.5-202ENST00000641448 1267 ntBASIC16.92■□□□□ 0.3
TNFSF9P41273 AL591163.1-201ENST00000641757 987 ntBASIC16.92■□□□□ 0.3
TNFSF9P41273 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
TNFSF9P41273 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC16.92■□□□□ 0.3
TNFSF9P41273 AC084364.1-201ENST00000551967 1556 ntBASIC16.92■□□□□ 0.3
TNFSF9P41273 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TNFSF9P41273 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
TNFSF9P41273 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
TNFSF9P41273 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC16.92■□□□□ 0.3
TNFSF9P41273 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TNFSF9P41273 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TNFSF9P41273 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
TNFSF9P41273 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC16.92■□□□□ 0.3
TNFSF9P41273 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TNFSF9P41273 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC16.91■□□□□ 0.3
TNFSF9P41273 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC16.91■□□□□ 0.3
TNFSF9P41273 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TNFSF9P41273 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC16.91■□□□□ 0.3
TNFSF9P41273 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC16.91■□□□□ 0.3
TNFSF9P41273 INTS4P2-202ENST00000614726 2019 ntBASIC16.91■□□□□ 0.3
TNFSF9P41273 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
TNFSF9P41273 EI24-214ENST00000620753 1718 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
TNFSF9P41273 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
TNFSF9P41273 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
TNFSF9P41273 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TNFSF9P41273 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC16.91■□□□□ 0.3
TNFSF9P41273 AC073130.2-202ENST00000444244 842 ntTSL 3 BASIC16.91■□□□□ 0.3
TNFSF9P41273 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TNFSF9P41273 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TNFSF9P41273 TMEM191A-209ENST00000452055 788 ntTSL 2 BASIC16.91■□□□□ 0.3
TNFSF9P41273 RN7SL837P-201ENST00000463010 287 ntBASIC16.91■□□□□ 0.3
TNFSF9P41273 AC005342.2-201ENST00000544163 315 ntTSL 3 BASIC16.91■□□□□ 0.3
TNFSF9P41273 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 147.3 ms