Protein–RNA interactions for Protein: P39905

GDNF, Glial cell line-derived neurotrophic factor, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDNFP39905 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC13.78□□□□□ -0.2
GDNFP39905 TGOLN2-203ENST00000398263 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
GDNFP39905 RAD51D-203ENST00000394589 2287 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
GDNFP39905 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
GDNFP39905 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
GDNFP39905 CRYBG2-210ENST00000527815 2523 ntAPPRIS ALT2 TSL 2 BASIC13.78□□□□□ -0.2
GDNFP39905 CYP1B1-205ENST00000610745 5250 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
GDNFP39905 GGA1-206ENST00000406772 3205 ntTSL 2 BASIC13.77□□□□□ -0.2
GDNFP39905 AC007326.2-201ENST00000624224 7579 ntBASIC13.77□□□□□ -0.2
GDNFP39905 DBR1-201ENST00000260803 2666 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
GDNFP39905 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
GDNFP39905 ZDHHC3-201ENST00000296127 3101 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
GDNFP39905 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC13.77□□□□□ -0.21
GDNFP39905 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
GDNFP39905 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC13.77□□□□□ -0.21
GDNFP39905 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
GDNFP39905 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
GDNFP39905 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
GDNFP39905 HTR3E-202ENST00000415389 2139 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
GDNFP39905 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
GDNFP39905 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC13.77□□□□□ -0.21
GDNFP39905 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC13.77□□□□□ -0.21
GDNFP39905 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC13.77□□□□□ -0.21
GDNFP39905 GTF2H2C-210ENST00000510979 2952 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
GDNFP39905 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC13.77□□□□□ -0.21
GDNFP39905 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC13.77□□□□□ -0.21
GDNFP39905 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC13.77□□□□□ -0.21
GDNFP39905 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC13.77□□□□□ -0.21
GDNFP39905 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC13.77□□□□□ -0.21
GDNFP39905 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC13.77□□□□□ -0.21
GDNFP39905 E2F6-212ENST00000546212 3191 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
GDNFP39905 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
GDNFP39905 GREM1-202ENST00000560830 2648 ntTSL 2 BASIC13.77□□□□□ -0.21
GDNFP39905 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC13.77□□□□□ -0.21
GDNFP39905 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC13.77□□□□□ -0.21
GDNFP39905 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC13.77□□□□□ -0.21
GDNFP39905 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC13.77□□□□□ -0.21
GDNFP39905 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC13.77□□□□□ -0.21
GDNFP39905 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC13.77□□□□□ -0.21
GDNFP39905 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
GDNFP39905 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC13.77□□□□□ -0.21
GDNFP39905 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC13.77□□□□□ -0.21
GDNFP39905 NATD1-201ENST00000611551 4931 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
GDNFP39905 ST20-AS1-201ENST00000560255 4223 ntBASIC13.77□□□□□ -0.21
GDNFP39905 PUS1-202ENST00000376649 4094 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
GDNFP39905 RNF182-208ENST00000544682 3495 ntAPPRIS P1 TSL 4 BASIC13.77□□□□□ -0.21
GDNFP39905 IGFBP5-201ENST00000233813 6215 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
GDNFP39905 SLC35E2B-203ENST00000611123 5948 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.21
GDNFP39905 GPN1-201ENST00000264718 2496 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
GDNFP39905 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC13.76□□□□□ -0.21
GDNFP39905 COL11A2-202ENST00000361917 6104 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
GDNFP39905 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC13.76□□□□□ -0.21
GDNFP39905 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
GDNFP39905 RUNX3-201ENST00000308873 3861 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
GDNFP39905 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC13.76□□□□□ -0.21
GDNFP39905 PPM1F-201ENST00000263212 5143 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
GDNFP39905 WDR1-203ENST00000382452 3142 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
GDNFP39905 GCLM-204ENST00000615724 3008 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
GDNFP39905 RBPMS-201ENST00000287771 2974 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
GDNFP39905 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
GDNFP39905 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
GDNFP39905 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
GDNFP39905 NCKIPSD-204ENST00000416649 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
GDNFP39905 BCL10-201ENST00000370580 2819 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
GDNFP39905 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
GDNFP39905 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC13.76□□□□□ -0.21
GDNFP39905 IL21R-AS1-201ENST00000563191 2615 ntTSL 2 BASIC13.76□□□□□ -0.21
GDNFP39905 MBOAT2-201ENST00000305997 7751 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
GDNFP39905 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC13.76□□□□□ -0.21
GDNFP39905 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
GDNFP39905 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
GDNFP39905 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
GDNFP39905 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC13.76□□□□□ -0.21
GDNFP39905 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
GDNFP39905 METTL26-205ENST00000397666 726 ntTSL 2 BASIC13.76□□□□□ -0.21
GDNFP39905 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
GDNFP39905 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
GDNFP39905 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC13.76□□□□□ -0.21
GDNFP39905 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
GDNFP39905 HCG4-201ENST00000418983 998 ntBASIC13.76□□□□□ -0.21
GDNFP39905 KRT18P2-201ENST00000447938 1258 ntBASIC13.76□□□□□ -0.21
GDNFP39905 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC13.76□□□□□ -0.21
GDNFP39905 AC018845.2-201ENST00000568326 409 ntBASIC13.76□□□□□ -0.21
GDNFP39905 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
GDNFP39905 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC13.76□□□□□ -0.21
GDNFP39905 WT1-AS_2.1-201ENST00000613208 137 ntBASIC13.76□□□□□ -0.21
GDNFP39905 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
GDNFP39905 NME4-212ENST00000621774 904 ntTSL 3 BASIC13.76□□□□□ -0.21
GDNFP39905 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC13.76□□□□□ -0.21
GDNFP39905 SERPINE3-204ENST00000524365 2293 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
GDNFP39905 EEF1A1-202ENST00000316292 4441 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
GDNFP39905 C16orf52-202ENST00000542527 4360 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
GDNFP39905 ANKRD46-205ENST00000520311 3270 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
GDNFP39905 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
GDNFP39905 NTRK2-201ENST00000277120 8633 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
GDNFP39905 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
GDNFP39905 TMTC1-207ENST00000552618 3915 ntTSL 5 BASIC13.76□□□□□ -0.21
GDNFP39905 PXDNL-201ENST00000356297 4805 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
GDNFP39905 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
GDNFP39905 AICDA-201ENST00000229335 2819 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms