Protein–RNA interactions for Protein: P37088

SCNN1A, Amiloride-sensitive sodium channel subunit alpha, humanhuman

Predictions only

Length 669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCNN1AP37088 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SCNN1AP37088 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
SCNN1AP37088 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
SCNN1AP37088 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SCNN1AP37088 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
SCNN1AP37088 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
SCNN1AP37088 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SCNN1AP37088 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC16.28■□□□□ 0.2
SCNN1AP37088 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
SCNN1AP37088 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC16.28■□□□□ 0.2
SCNN1AP37088 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
SCNN1AP37088 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
SCNN1AP37088 TDG-209ENST00000544861 1387 ntTSL 2 BASIC16.27■□□□□ 0.2
SCNN1AP37088 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
SCNN1AP37088 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
SCNN1AP37088 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
SCNN1AP37088 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
SCNN1AP37088 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC16.27■□□□□ 0.2
SCNN1AP37088 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
SCNN1AP37088 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC16.27■□□□□ 0.2
SCNN1AP37088 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC16.27■□□□□ 0.2
SCNN1AP37088 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
SCNN1AP37088 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
SCNN1AP37088 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
SCNN1AP37088 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
SCNN1AP37088 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
SCNN1AP37088 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
SCNN1AP37088 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
SCNN1AP37088 OSM-203ENST00000403463 464 ntTSL 3 BASIC16.27■□□□□ 0.2
SCNN1AP37088 MPV17-208ENST00000405076 603 ntTSL 5 BASIC16.27■□□□□ 0.2
SCNN1AP37088 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC16.27■□□□□ 0.2
SCNN1AP37088 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
SCNN1AP37088 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC16.27■□□□□ 0.2
SCNN1AP37088 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC16.27■□□□□ 0.2
SCNN1AP37088 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC16.27■□□□□ 0.2
SCNN1AP37088 FAM86LP-201ENST00000478302 853 ntBASIC16.27■□□□□ 0.2
SCNN1AP37088 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC16.27■□□□□ 0.2
SCNN1AP37088 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
SCNN1AP37088 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
SCNN1AP37088 RN7SL371P-201ENST00000578099 267 ntBASIC16.27■□□□□ 0.2
SCNN1AP37088 GPX4-206ENST00000588919 803 ntTSL 2 BASIC16.27■□□□□ 0.2
SCNN1AP37088 AC008761.3-201ENST00000624803 892 ntBASIC16.27■□□□□ 0.2
SCNN1AP37088 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC16.27■□□□□ 0.2
SCNN1AP37088 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
SCNN1AP37088 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
SCNN1AP37088 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC16.27■□□□□ 0.19
SCNN1AP37088 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
SCNN1AP37088 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
SCNN1AP37088 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
SCNN1AP37088 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
SCNN1AP37088 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC16.27■□□□□ 0.19
SCNN1AP37088 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
SCNN1AP37088 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC16.27■□□□□ 0.19
SCNN1AP37088 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
SCNN1AP37088 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SCNN1AP37088 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
SCNN1AP37088 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
SCNN1AP37088 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SCNN1AP37088 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC16.26■□□□□ 0.19
SCNN1AP37088 AC148477.4-201ENST00000613430 1793 ntBASIC16.26■□□□□ 0.19
SCNN1AP37088 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
SCNN1AP37088 FUK-207ENST00000571514 3054 ntTSL 2 BASIC16.26■□□□□ 0.19
SCNN1AP37088 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
SCNN1AP37088 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC16.26■□□□□ 0.19
SCNN1AP37088 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC16.26■□□□□ 0.19
SCNN1AP37088 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
SCNN1AP37088 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
SCNN1AP37088 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
SCNN1AP37088 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
SCNN1AP37088 MIR661-201ENST00000384842 89 ntBASIC16.26■□□□□ 0.19
SCNN1AP37088 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC16.26■□□□□ 0.19
SCNN1AP37088 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC16.26■□□□□ 0.19
SCNN1AP37088 GNAQP1-201ENST00000444815 1067 ntBASIC16.26■□□□□ 0.19
SCNN1AP37088 RPL13AP25-201ENST00000484130 612 ntBASIC16.26■□□□□ 0.19
SCNN1AP37088 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC16.26■□□□□ 0.19
SCNN1AP37088 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC16.26■□□□□ 0.19
SCNN1AP37088 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC16.26■□□□□ 0.19
SCNN1AP37088 RN7SL204P-201ENST00000582831 262 ntBASIC16.26■□□□□ 0.19
SCNN1AP37088 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
SCNN1AP37088 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC16.26■□□□□ 0.19
SCNN1AP37088 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SCNN1AP37088 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
SCNN1AP37088 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SCNN1AP37088 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
SCNN1AP37088 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
SCNN1AP37088 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
SCNN1AP37088 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SCNN1AP37088 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
SCNN1AP37088 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
SCNN1AP37088 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SCNN1AP37088 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
SCNN1AP37088 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SCNN1AP37088 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SCNN1AP37088 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
SCNN1AP37088 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC16.26■□□□□ 0.19
SCNN1AP37088 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
SCNN1AP37088 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC16.26■□□□□ 0.19
SCNN1AP37088 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
SCNN1AP37088 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
SCNN1AP37088 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms