Protein–RNA interactions for Protein: P35913

PDE6B, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta, humanhuman

Predictions only

Length 854 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6BP35913 DBI-203ENST00000393103 599 ntAPPRIS P4 TSL 1 (best) BASIC19.15■□□□□ 0.66
PDE6BP35913 AL645937.2-201ENST00000396808 931 ntBASIC19.15■□□□□ 0.66
PDE6BP35913 AL139094.1-201ENST00000405549 1188 ntBASIC19.15■□□□□ 0.66
PDE6BP35913 DLGAP4-AS1-202ENST00000433238 593 ntTSL 3 BASIC19.15■□□□□ 0.66
PDE6BP35913 LINC02028-203ENST00000443776 453 ntTSL 3 BASIC19.15■□□□□ 0.66
PDE6BP35913 PENK-202ENST00000451791 1029 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PDE6BP35913 AC097103.2-206ENST00000514729 588 ntTSL 4 BASIC19.15■□□□□ 0.66
PDE6BP35913 MSRB3-209ENST00000540804 884 ntTSL 2 BASIC19.15■□□□□ 0.66
PDE6BP35913 RN7SL713P-201ENST00000582127 302 ntBASIC19.15■□□□□ 0.66
PDE6BP35913 FXYD6-217ENST00000584394 669 ntTSL 3 BASIC19.15■□□□□ 0.66
PDE6BP35913 SPCS2P2-201ENST00000603270 608 ntBASIC19.15■□□□□ 0.66
PDE6BP35913 Metazoa_SRP.69-201ENST00000615730 281 ntBASIC19.15■□□□□ 0.66
PDE6BP35913 PLEKHB2-211ENST00000628582 1297 ntTSL 2 BASIC19.15■□□□□ 0.66
PDE6BP35913 AC128714.1-201ENST00000637035 887 ntBASIC19.15■□□□□ 0.66
PDE6BP35913 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PDE6BP35913 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
PDE6BP35913 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
PDE6BP35913 EML3-216ENST00000529309 2909 ntTSL 2 BASIC19.15■□□□□ 0.66
PDE6BP35913 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
PDE6BP35913 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PDE6BP35913 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
PDE6BP35913 AC106886.4-201ENST00000623557 2502 ntBASIC19.15■□□□□ 0.66
PDE6BP35913 MRPS7-201ENST00000245539 1406 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PDE6BP35913 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PDE6BP35913 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC19.15■□□□□ 0.66
PDE6BP35913 ACE-204ENST00000428043 5120 ntTSL 2 BASIC19.15■□□□□ 0.66
PDE6BP35913 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PDE6BP35913 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
PDE6BP35913 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC19.15■□□□□ 0.66
PDE6BP35913 KRTAP10-7-201ENST00000609664 1578 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
PDE6BP35913 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
PDE6BP35913 AMT-224ENST00000635808 1610 ntTSL 5 BASIC19.14■□□□□ 0.66
PDE6BP35913 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC19.14■□□□□ 0.65
PDE6BP35913 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
PDE6BP35913 BORCS5-201ENST00000298571 549 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
PDE6BP35913 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
PDE6BP35913 SPAG11A-203ENST00000351436 534 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
PDE6BP35913 SPAG11B-204ENST00000361111 534 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
PDE6BP35913 TMEM243-202ENST00000423734 601 ntTSL 2 BASIC19.14■□□□□ 0.65
PDE6BP35913 AL451042.2-201ENST00000424774 904 ntTSL 2 BASIC19.14■□□□□ 0.65
PDE6BP35913 ALG1L2-201ENST00000425059 969 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
PDE6BP35913 LINC01088-201ENST00000437737 973 ntTSL 5 BASIC19.14■□□□□ 0.65
PDE6BP35913 AC253536.4-201ENST00000440539 267 ntBASIC19.14■□□□□ 0.65
PDE6BP35913 AP006333.2-201ENST00000544948 732 ntTSL 3 BASIC19.14■□□□□ 0.65
PDE6BP35913 GEMIN7-204ENST00000591747 576 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
PDE6BP35913 ZACNP1-201ENST00000612259 710 ntBASIC19.14■□□□□ 0.65
PDE6BP35913 SIRT2-219ENST00000613542 1170 ntTSL 5 BASIC19.14■□□□□ 0.65
PDE6BP35913 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
PDE6BP35913 AL109910.1-201ENST00000452071 1330 ntTSL 2 BASIC19.14■□□□□ 0.65
PDE6BP35913 TUBBP5-203ENST00000508529 1334 ntBASIC19.14■□□□□ 0.65
PDE6BP35913 MPP1-204ENST00000393531 1389 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
PDE6BP35913 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC19.14■□□□□ 0.65
PDE6BP35913 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC19.13■□□□□ 0.65
PDE6BP35913 MFF-204ENST00000353339 2186 ntTSL 5 BASIC19.13■□□□□ 0.65
PDE6BP35913 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
PDE6BP35913 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
PDE6BP35913 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
PDE6BP35913 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
PDE6BP35913 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
PDE6BP35913 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC19.13■□□□□ 0.65
PDE6BP35913 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC19.13■□□□□ 0.65
PDE6BP35913 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
PDE6BP35913 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC19.13■□□□□ 0.65
PDE6BP35913 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC19.13■□□□□ 0.65
PDE6BP35913 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC19.13■□□□□ 0.65
PDE6BP35913 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC19.13■□□□□ 0.65
PDE6BP35913 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
PDE6BP35913 ANGPTL8-201ENST00000252453 872 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
PDE6BP35913 CDRT15-202ENST00000431716 655 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
PDE6BP35913 Z97180.1-201ENST00000445173 988 ntBASIC19.13■□□□□ 0.65
PDE6BP35913 TCEAL4-208ENST00000472484 1273 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
PDE6BP35913 SDHD-202ENST00000525291 790 ntTSL 3 BASIC19.13■□□□□ 0.65
PDE6BP35913 AL136088.1-202ENST00000525871 439 ntTSL 2 BASIC19.13■□□□□ 0.65
PDE6BP35913 AC105105.3-201ENST00000585470 646 ntTSL 5 BASIC19.13■□□□□ 0.65
PDE6BP35913 CROCCP3-204ENST00000590118 574 ntTSL 4 BASIC19.13■□□□□ 0.65
PDE6BP35913 INO80C-210ENST00000590757 595 ntTSL 2 BASIC19.13■□□□□ 0.65
PDE6BP35913 LRWD1-209ENST00000626402 138 ntTSL 3 BASIC19.13■□□□□ 0.65
PDE6BP35913 GNAI2-207ENST00000451956 1486 ntTSL 2 BASIC19.13■□□□□ 0.65
PDE6BP35913 HSD17B6-201ENST00000322165 1512 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
PDE6BP35913 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
PDE6BP35913 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC19.13■□□□□ 0.65
PDE6BP35913 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC19.13■□□□□ 0.65
PDE6BP35913 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
PDE6BP35913 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
PDE6BP35913 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC19.13■□□□□ 0.65
PDE6BP35913 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
PDE6BP35913 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
PDE6BP35913 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
PDE6BP35913 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC19.13■□□□□ 0.65
PDE6BP35913 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
PDE6BP35913 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
PDE6BP35913 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
PDE6BP35913 AC011270.2-201ENST00000624293 2550 ntBASIC19.12■□□□□ 0.65
PDE6BP35913 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC19.12■□□□□ 0.65
PDE6BP35913 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC19.12■□□□□ 0.65
PDE6BP35913 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
PDE6BP35913 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC19.12■□□□□ 0.65
PDE6BP35913 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
PDE6BP35913 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC19.12■□□□□ 0.65
PDE6BP35913 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC19.12■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 37.6 ms