Protein–RNA interactions for Protein: P35221

CTNNA1, Catenin alpha-1, humanhuman

Known RBP Predictions only

Length 906 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1P35221 STRN3-201ENST00000355683 3970 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CTNNA1P35221 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC16.67■□□□□ 0.26
CTNNA1P35221 KCNQ4-201ENST00000347132 4099 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
CTNNA1P35221 CDC42EP4-202ENST00000439510 2879 ntTSL 2 BASIC16.67■□□□□ 0.26
CTNNA1P35221 ZBTB32-202ENST00000392197 2068 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
CTNNA1P35221 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC16.67■□□□□ 0.26
CTNNA1P35221 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CTNNA1P35221 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
CTNNA1P35221 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC16.67■□□□□ 0.26
CTNNA1P35221 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CTNNA1P35221 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC16.67■□□□□ 0.26
CTNNA1P35221 FAM58CP-201ENST00000435741 640 ntBASIC16.67■□□□□ 0.26
CTNNA1P35221 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC16.67■□□□□ 0.26
CTNNA1P35221 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC16.67■□□□□ 0.26
CTNNA1P35221 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC16.67■□□□□ 0.26
CTNNA1P35221 RNF34-208ENST00000555076 593 ntTSL 3 BASIC16.67■□□□□ 0.26
CTNNA1P35221 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC16.67■□□□□ 0.26
CTNNA1P35221 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC16.67■□□□□ 0.26
CTNNA1P35221 SH2D3C-206ENST00000429553 2794 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CTNNA1P35221 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC16.67■□□□□ 0.26
CTNNA1P35221 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC16.67■□□□□ 0.26
CTNNA1P35221 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC16.67■□□□□ 0.26
CTNNA1P35221 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC16.67■□□□□ 0.26
CTNNA1P35221 MYO15B-237ENST00000642007 4893 ntBASIC16.67■□□□□ 0.26
CTNNA1P35221 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
CTNNA1P35221 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC16.67■□□□□ 0.26
CTNNA1P35221 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC16.67■□□□□ 0.26
CTNNA1P35221 STK33-217ENST00000534493 1895 ntTSL 2 BASIC16.67■□□□□ 0.26
CTNNA1P35221 LINC01101-201ENST00000622953 1884 ntBASIC16.67■□□□□ 0.26
CTNNA1P35221 IMPDH1-203ENST00000354269 2580 ntTSL 2 BASIC16.67■□□□□ 0.26
CTNNA1P35221 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
CTNNA1P35221 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CTNNA1P35221 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC16.67■□□□□ 0.26
CTNNA1P35221 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CTNNA1P35221 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC16.66■□□□□ 0.26
CTNNA1P35221 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CTNNA1P35221 RTEL1-201ENST00000318100 4676 ntTSL 2 BASIC16.66■□□□□ 0.26
CTNNA1P35221 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC16.66■□□□□ 0.26
CTNNA1P35221 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CTNNA1P35221 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CTNNA1P35221 AC245052.4-201ENST00000452097 4158 ntTSL 2 BASIC16.66■□□□□ 0.26
CTNNA1P35221 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC16.66■□□□□ 0.26
CTNNA1P35221 CICP23-201ENST00000605013 2741 ntBASIC16.66■□□□□ 0.26
CTNNA1P35221 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC16.66■□□□□ 0.26
CTNNA1P35221 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CTNNA1P35221 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CTNNA1P35221 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CTNNA1P35221 IGSF1-204ENST00000370903 4594 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
CTNNA1P35221 HLA-H-201ENST00000383620 1096 ntBASIC16.66■□□□□ 0.26
CTNNA1P35221 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CTNNA1P35221 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CTNNA1P35221 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CTNNA1P35221 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC16.66■□□□□ 0.26
CTNNA1P35221 KNSTRN-202ENST00000416151 1899 ntTSL 3 BASIC16.66■□□□□ 0.26
CTNNA1P35221 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC16.66■□□□□ 0.26
CTNNA1P35221 SPCS2P4-201ENST00000436160 681 ntBASIC16.66■□□□□ 0.26
CTNNA1P35221 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
CTNNA1P35221 KRT8P37-201ENST00000451609 1420 ntBASIC16.66■□□□□ 0.26
CTNNA1P35221 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC16.66■□□□□ 0.26
CTNNA1P35221 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC16.66■□□□□ 0.26
CTNNA1P35221 CCDC74BP1-201ENST00000508880 1123 ntBASIC16.66■□□□□ 0.26
CTNNA1P35221 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CTNNA1P35221 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC16.66■□□□□ 0.26
CTNNA1P35221 LINC01225-203ENST00000563550 1244 ntBASIC16.66■□□□□ 0.26
CTNNA1P35221 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CTNNA1P35221 SSH2-211ENST00000590153 570 ntTSL 4 BASIC16.66■□□□□ 0.26
CTNNA1P35221 AL450472.2-201ENST00000603663 1156 ntBASIC16.66■□□□□ 0.26
CTNNA1P35221 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC16.66■□□□□ 0.26
CTNNA1P35221 AC120114.3-201ENST00000611923 658 ntBASIC16.66■□□□□ 0.26
CTNNA1P35221 CAND2-206ENST00000626378 333 ntTSL 5 BASIC16.66■□□□□ 0.26
CTNNA1P35221 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CTNNA1P35221 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CTNNA1P35221 TAF1C-216ENST00000566732 2972 ntAPPRIS ALT2 TSL 2 BASIC16.66■□□□□ 0.26
CTNNA1P35221 SLCO6A1-205ENST00000506729 2689 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CTNNA1P35221 PSD2-201ENST00000274710 4513 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CTNNA1P35221 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC16.66■□□□□ 0.26
CTNNA1P35221 KLHL26-201ENST00000300976 4407 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CTNNA1P35221 ADAM15-204ENST00000359280 2874 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
CTNNA1P35221 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CTNNA1P35221 C4A-259ENST00000498271 5269 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CTNNA1P35221 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CTNNA1P35221 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CTNNA1P35221 AC091951.1-201ENST00000512854 2465 ntBASIC16.65■□□□□ 0.26
CTNNA1P35221 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC16.65■□□□□ 0.26
CTNNA1P35221 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CTNNA1P35221 KCNC1-201ENST00000265969 4295 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
CTNNA1P35221 KRT8P44-201ENST00000441609 1350 ntBASIC16.65■□□□□ 0.26
CTNNA1P35221 POU2F2-207ENST00000529067 2657 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CTNNA1P35221 BAG4-201ENST00000287322 4453 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CTNNA1P35221 IFNAR1-201ENST00000270139 6139 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CTNNA1P35221 B4GALNT1-201ENST00000341156 3036 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CTNNA1P35221 SLC35A2-204ENST00000376521 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CTNNA1P35221 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
CTNNA1P35221 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC16.65■□□□□ 0.26
CTNNA1P35221 SARM1-208ENST00000585482 10309 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CTNNA1P35221 KIAA0368-201ENST00000259335 7391 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
CTNNA1P35221 CATSPER4-202ENST00000456354 1912 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
CTNNA1P35221 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CTNNA1P35221 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC16.65■□□□□ 0.26
CTNNA1P35221 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 24 ms