Protein–RNA interactions for Protein: P23025

XPA, DNA repair protein complementing XP-A cells, humanhuman

Predicted RBP Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XPAP23025 BCRP3-202ENST00000621462 1021 ntTSL 3 BASIC15.89■□□□□ 0.13
XPAP23025 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC15.89■□□□□ 0.13
XPAP23025 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
XPAP23025 GRSF1-201ENST00000254799 6666 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
XPAP23025 SNX19-201ENST00000265909 6535 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
XPAP23025 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
XPAP23025 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
XPAP23025 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
XPAP23025 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
XPAP23025 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
XPAP23025 PCDH17-201ENST00000377918 8232 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
XPAP23025 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
XPAP23025 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
XPAP23025 AL513523.2-202ENST00000427283 2040 ntBASIC15.89■□□□□ 0.13
XPAP23025 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
XPAP23025 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
XPAP23025 EEF1A1-202ENST00000316292 4441 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
XPAP23025 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
XPAP23025 MAU2-201ENST00000262815 4994 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
XPAP23025 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC15.88■□□□□ 0.13
XPAP23025 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC15.88■□□□□ 0.13
XPAP23025 MROH1-207ENST00000528919 5234 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
XPAP23025 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
XPAP23025 C12orf49-201ENST00000261318 8404 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
XPAP23025 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
XPAP23025 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
XPAP23025 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
XPAP23025 NME3-201ENST00000219302 1069 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
XPAP23025 PKIG-203ENST00000372887 769 ntTSL 3 BASIC15.88■□□□□ 0.13
XPAP23025 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC15.88■□□□□ 0.13
XPAP23025 AC136604.1-201ENST00000418535 575 ntBASIC15.88■□□□□ 0.13
XPAP23025 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC15.88■□□□□ 0.13
XPAP23025 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
XPAP23025 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
XPAP23025 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC15.88■□□□□ 0.13
XPAP23025 AC104596.2-201ENST00000512793 793 ntBASIC15.88■□□□□ 0.13
XPAP23025 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC15.88■□□□□ 0.13
XPAP23025 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC15.88■□□□□ 0.13
XPAP23025 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC15.88■□□□□ 0.13
XPAP23025 AC023310.3-201ENST00000557027 670 ntBASIC15.88■□□□□ 0.13
XPAP23025 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC15.88■□□□□ 0.13
XPAP23025 AC100756.1-201ENST00000562736 682 ntBASIC15.88■□□□□ 0.13
XPAP23025 AC138749.3-201ENST00000567691 622 ntBASIC15.88■□□□□ 0.13
XPAP23025 ARL16-202ENST00000570561 768 ntTSL 2 BASIC15.88■□□□□ 0.13
XPAP23025 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC15.88■□□□□ 0.13
XPAP23025 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC15.88■□□□□ 0.13
XPAP23025 AC116165.1-201ENST00000611806 668 ntBASIC15.88■□□□□ 0.13
XPAP23025 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC15.88■□□□□ 0.13
XPAP23025 AF228730.6-201ENST00000641497 218 ntBASIC15.88■□□□□ 0.13
XPAP23025 AC084121.3-201ENST00000641716 218 ntBASIC15.88■□□□□ 0.13
XPAP23025 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
XPAP23025 PHF24-201ENST00000242315 5718 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
XPAP23025 MEGF11-203ENST00000409699 6163 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
XPAP23025 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
XPAP23025 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC15.88■□□□□ 0.13
XPAP23025 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
XPAP23025 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
XPAP23025 NBEA-201ENST00000310336 10794 ntAPPRIS ALT1 TSL 1 (best) BASIC15.88■□□□□ 0.13
XPAP23025 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
XPAP23025 SLC7A15P-201ENST00000424028 1363 ntBASIC15.87■□□□□ 0.13
XPAP23025 AL607033.1-201ENST00000623900 1599 ntBASIC15.87■□□□□ 0.13
XPAP23025 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC15.87■□□□□ 0.13
XPAP23025 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC15.87■□□□□ 0.13
XPAP23025 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC15.87■□□□□ 0.13
XPAP23025 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC15.87■□□□□ 0.13
XPAP23025 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC15.87■□□□□ 0.13
XPAP23025 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC15.87■□□□□ 0.13
XPAP23025 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
XPAP23025 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
XPAP23025 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC15.87■□□□□ 0.13
XPAP23025 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
XPAP23025 GPRASP1-205ENST00000537097 5980 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
XPAP23025 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC15.87■□□□□ 0.13
XPAP23025 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
XPAP23025 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC15.87■□□□□ 0.13
XPAP23025 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC15.87■□□□□ 0.13
XPAP23025 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
XPAP23025 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
XPAP23025 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
XPAP23025 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
XPAP23025 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC15.87■□□□□ 0.13
XPAP23025 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC15.87■□□□□ 0.13
XPAP23025 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC15.87■□□□□ 0.13
XPAP23025 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC15.87■□□□□ 0.13
XPAP23025 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC15.87■□□□□ 0.13
XPAP23025 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC15.87■□□□□ 0.13
XPAP23025 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
XPAP23025 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
XPAP23025 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
XPAP23025 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
XPAP23025 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
XPAP23025 SNX30-201ENST00000374232 7622 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
XPAP23025 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
XPAP23025 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
XPAP23025 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC15.87■□□□□ 0.13
XPAP23025 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
XPAP23025 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
XPAP23025 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC15.87■□□□□ 0.13
XPAP23025 CAMKK2-203ENST00000347034 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
XPAP23025 AC024909.3-201ENST00000611513 2257 ntBASIC15.87■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 40.5 ms