Protein–RNA interactions for Protein: P22223

CDH3, Cadherin-3, humanhuman

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3P22223 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC15.5■□□□□ 0.07
CDH3P22223 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC15.5■□□□□ 0.07
CDH3P22223 AC002472.2-201ENST00000442739 958 ntBASIC15.5■□□□□ 0.07
CDH3P22223 LHX6-205ENST00000464484 666 ntTSL 2 BASIC15.5■□□□□ 0.07
CDH3P22223 OARD1-208ENST00000469104 704 ntTSL 2 BASIC15.5■□□□□ 0.07
CDH3P22223 TERF1P3-201ENST00000505638 1227 ntBASIC15.5■□□□□ 0.07
CDH3P22223 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC15.5■□□□□ 0.07
CDH3P22223 STOM-203ENST00000538954 1257 ntTSL 5 BASIC15.5■□□□□ 0.07
CDH3P22223 RN7SL204P-201ENST00000582831 262 ntBASIC15.5■□□□□ 0.07
CDH3P22223 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC15.5■□□□□ 0.07
CDH3P22223 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC15.5■□□□□ 0.07
CDH3P22223 SNX18-202ENST00000343017 3140 ntBASIC15.5■□□□□ 0.07
CDH3P22223 BANP-203ENST00000393207 2438 ntTSL 2 BASIC15.5■□□□□ 0.07
CDH3P22223 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
CDH3P22223 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC15.5■□□□□ 0.07
CDH3P22223 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC15.5■□□□□ 0.07
CDH3P22223 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC15.5■□□□□ 0.07
CDH3P22223 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC15.5■□□□□ 0.07
CDH3P22223 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CDH3P22223 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
CDH3P22223 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC15.5■□□□□ 0.07
CDH3P22223 MAP4K1-210ENST00000591517 2700 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
CDH3P22223 SARM1-208ENST00000585482 10309 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CDH3P22223 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CDH3P22223 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CDH3P22223 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
CDH3P22223 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
CDH3P22223 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC15.49■□□□□ 0.07
CDH3P22223 PODN-201ENST00000312553 3010 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
CDH3P22223 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
CDH3P22223 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CDH3P22223 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
CDH3P22223 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CDH3P22223 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC15.49■□□□□ 0.07
CDH3P22223 AL136982.4-201ENST00000437689 1740 ntBASIC15.49■□□□□ 0.07
CDH3P22223 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
CDH3P22223 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CDH3P22223 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CDH3P22223 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
CDH3P22223 JPH4-205ENST00000622501 3489 ntAPPRIS ALT1 TSL 5 BASIC15.49■□□□□ 0.07
CDH3P22223 PMPCB-201ENST00000249269 2472 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CDH3P22223 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC15.49■□□□□ 0.07
CDH3P22223 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
CDH3P22223 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
CDH3P22223 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
CDH3P22223 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
CDH3P22223 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CDH3P22223 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC15.49■□□□□ 0.07
CDH3P22223 FAM207CP-201ENST00000443486 507 ntBASIC15.49■□□□□ 0.07
CDH3P22223 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
CDH3P22223 AC138761.1-201ENST00000584393 385 ntBASIC15.49■□□□□ 0.07
CDH3P22223 LINC02560-201ENST00000596379 459 ntBASIC15.49■□□□□ 0.07
CDH3P22223 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC15.49■□□□□ 0.07
CDH3P22223 HFE2-206ENST00000634927 506 ntTSL 4 BASIC15.49■□□□□ 0.07
CDH3P22223 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CDH3P22223 HBP1-201ENST00000222574 2829 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CDH3P22223 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC15.49■□□□□ 0.07
CDH3P22223 INPP5B-202ENST00000373023 4694 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
CDH3P22223 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
CDH3P22223 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC15.49■□□□□ 0.07
CDH3P22223 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CDH3P22223 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CDH3P22223 TNXB-209ENST00000613214 6842 ntTSL 5 BASIC15.49■□□□□ 0.07
CDH3P22223 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CDH3P22223 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC15.49■□□□□ 0.07
CDH3P22223 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CDH3P22223 CYP4F24P-201ENST00000586049 1580 ntBASIC15.49■□□□□ 0.07
CDH3P22223 ANKRD26-201ENST00000376087 6591 ntAPPRIS P2 TSL 5 BASIC15.49■□□□□ 0.07
CDH3P22223 VTN-201ENST00000226218 2149 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CDH3P22223 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
CDH3P22223 SATB2-205ENST00000443023 6194 ntTSL 5 BASIC15.48■□□□□ 0.07
CDH3P22223 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC15.48■□□□□ 0.07
CDH3P22223 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
CDH3P22223 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC15.48■□□□□ 0.07
CDH3P22223 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC15.48■□□□□ 0.07
CDH3P22223 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CDH3P22223 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC15.48■□□□□ 0.07
CDH3P22223 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC15.48■□□□□ 0.07
CDH3P22223 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CDH3P22223 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
CDH3P22223 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
CDH3P22223 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
CDH3P22223 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CDH3P22223 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC15.48■□□□□ 0.07
CDH3P22223 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
CDH3P22223 SPDYE17-201ENST00000412399 783 ntBASIC15.48■□□□□ 0.07
CDH3P22223 MRPS18AP1-201ENST00000414458 589 ntBASIC15.48■□□□□ 0.07
CDH3P22223 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
CDH3P22223 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC15.48■□□□□ 0.07
CDH3P22223 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
CDH3P22223 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC15.48■□□□□ 0.07
CDH3P22223 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC15.48■□□□□ 0.07
CDH3P22223 AC243562.2-201ENST00000561247 970 ntBASIC15.48■□□□□ 0.07
CDH3P22223 SSH2-210ENST00000582084 560 ntTSL 3 BASIC15.48■□□□□ 0.07
CDH3P22223 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
CDH3P22223 AL844908.2-201ENST00000609461 460 ntBASIC15.48■□□□□ 0.07
CDH3P22223 AC009118.2-201ENST00000613275 655 ntBASIC15.48■□□□□ 0.07
CDH3P22223 MIR6069-201ENST00000620069 79 ntBASIC15.48■□□□□ 0.07
CDH3P22223 AC008761.3-201ENST00000624803 892 ntBASIC15.48■□□□□ 0.07
CDH3P22223 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 32 ms