Protein–RNA interactions for Protein: P20338

RAB4A, Ras-related protein Rab-4A, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB4AP20338 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
RAB4AP20338 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC12.15□□□□□ -0.47
RAB4AP20338 ADCY7-202ENST00000394697 6213 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.47
RAB4AP20338 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC12.14□□□□□ -0.47
RAB4AP20338 ADAM33-201ENST00000350009 3480 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
RAB4AP20338 SLC12A6-206ENST00000558589 3866 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
RAB4AP20338 PCMTD1-201ENST00000360540 4252 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
RAB4AP20338 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC12.14□□□□□ -0.47
RAB4AP20338 MYH14-201ENST00000262269 3848 ntTSL 5 BASIC12.14□□□□□ -0.47
RAB4AP20338 DHX16-202ENST00000376442 3445 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
RAB4AP20338 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC12.14□□□□□ -0.47
RAB4AP20338 POU2F2-216ENST00000560558 3282 ntTSL 5 BASIC12.14□□□□□ -0.47
RAB4AP20338 SLC1A7-206ENST00000620347 2873 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
RAB4AP20338 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
RAB4AP20338 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC12.14□□□□□ -0.47
RAB4AP20338 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
RAB4AP20338 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
RAB4AP20338 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
RAB4AP20338 ZNF717-204ENST00000478296 3875 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
RAB4AP20338 AC106818.1-201ENST00000623223 3242 ntBASIC12.14□□□□□ -0.47
RAB4AP20338 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC12.14□□□□□ -0.47
RAB4AP20338 AMER3-202ENST00000423981 6172 ntAPPRIS P1 TSL 4 BASIC12.14□□□□□ -0.47
RAB4AP20338 CDCA3-207ENST00000538862 1943 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
RAB4AP20338 BEAN1-201ENST00000299694 2160 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
RAB4AP20338 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
RAB4AP20338 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
RAB4AP20338 ANKRD20A18P-201ENST00000359341 492 ntBASIC12.14□□□□□ -0.47
RAB4AP20338 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC12.14□□□□□ -0.47
RAB4AP20338 CD9-202ENST00000382515 1229 ntTSL 5 BASIC12.14□□□□□ -0.47
RAB4AP20338 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC12.14□□□□□ -0.47
RAB4AP20338 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC12.14□□□□□ -0.47
RAB4AP20338 ACTG1P4-201ENST00000425123 1122 ntBASIC12.14□□□□□ -0.47
RAB4AP20338 TSPY20P-201ENST00000450910 630 ntBASIC12.14□□□□□ -0.47
RAB4AP20338 AC008550.1-201ENST00000511500 884 ntBASIC12.14□□□□□ -0.47
RAB4AP20338 CD320-202ENST00000537716 1119 ntTSL 2 BASIC12.14□□□□□ -0.47
RAB4AP20338 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC12.14□□□□□ -0.47
RAB4AP20338 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC12.14□□□□□ -0.47
RAB4AP20338 AD001527.2-201ENST00000622994 785 ntBASIC12.14□□□□□ -0.47
RAB4AP20338 PIM1-201ENST00000373509 2650 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
RAB4AP20338 MVP-202ENST00000395353 2925 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
RAB4AP20338 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC12.14□□□□□ -0.47
RAB4AP20338 FURIN-206ENST00000610579 4191 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
RAB4AP20338 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC12.14□□□□□ -0.47
RAB4AP20338 GMIP-201ENST00000203556 3538 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
RAB4AP20338 TRPM2-201ENST00000300481 5627 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
RAB4AP20338 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
RAB4AP20338 MAMDC4-202ENST00000445819 3895 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
RAB4AP20338 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC12.14□□□□□ -0.47
RAB4AP20338 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC12.14□□□□□ -0.47
RAB4AP20338 ARAP3-207ENST00000626478 4928 ntTSL 5 BASIC12.14□□□□□ -0.47
RAB4AP20338 REV1-202ENST00000393445 4686 ntAPPRIS ALT1 TSL 1 (best) BASIC12.14□□□□□ -0.47
RAB4AP20338 C22orf34-201ENST00000343999 2816 ntTSL 2 BASIC12.14□□□□□ -0.47
RAB4AP20338 QSOX1-202ENST00000367602 9311 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
RAB4AP20338 DYNC1I2-203ENST00000409197 2572 ntAPPRIS P4 TSL 1 (best) BASIC12.14□□□□□ -0.47
RAB4AP20338 DYNC1I2-206ENST00000409773 2583 ntTSL 2 BASIC12.14□□□□□ -0.47
RAB4AP20338 GRM4-203ENST00000455714 2574 ntTSL 2 BASIC12.14□□□□□ -0.47
RAB4AP20338 ARFGEF1-201ENST00000262215 7225 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
RAB4AP20338 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
RAB4AP20338 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
RAB4AP20338 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
RAB4AP20338 SNED1-201ENST00000310397 8174 ntAPPRIS P2 TSL 5 BASIC12.14□□□□□ -0.47
RAB4AP20338 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC12.14□□□□□ -0.47
RAB4AP20338 KIF3A-201ENST00000378735 3266 ntAPPRIS ALT1 TSL 1 (best) BASIC12.13□□□□□ -0.47
RAB4AP20338 MAGIX-208ENST00000616266 3295 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
RAB4AP20338 USP19-206ENST00000417901 4706 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
RAB4AP20338 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
RAB4AP20338 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
RAB4AP20338 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
RAB4AP20338 DSP-202ENST00000418664 7812 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
RAB4AP20338 HK2-201ENST00000290573 5772 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
RAB4AP20338 HNRNPRP1-201ENST00000453465 1695 ntBASIC12.13□□□□□ -0.47
RAB4AP20338 SAMD14-202ENST00000330175 4425 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
RAB4AP20338 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC12.13□□□□□ -0.47
RAB4AP20338 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC12.13□□□□□ -0.47
RAB4AP20338 ARID3B-201ENST00000346246 4271 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
RAB4AP20338 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC12.13□□□□□ -0.47
RAB4AP20338 AC036214.1-201ENST00000502766 2126 ntTSL 2 BASIC12.13□□□□□ -0.47
RAB4AP20338 THBD-201ENST00000377103 4109 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
RAB4AP20338 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC12.13□□□□□ -0.47
RAB4AP20338 RNF122-201ENST00000256257 1868 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
RAB4AP20338 SLC22A2-202ENST00000366953 2597 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
RAB4AP20338 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC12.13□□□□□ -0.47
RAB4AP20338 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
RAB4AP20338 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC12.13□□□□□ -0.47
RAB4AP20338 BAALC-201ENST00000297574 801 ntTSL 3 BASIC12.13□□□□□ -0.47
RAB4AP20338 BAALC-202ENST00000306391 243 ntTSL 5 BASIC12.13□□□□□ -0.47
RAB4AP20338 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
RAB4AP20338 BAALC-204ENST00000330955 222 ntTSL 5 BASIC12.13□□□□□ -0.47
RAB4AP20338 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC12.13□□□□□ -0.47
RAB4AP20338 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC12.13□□□□□ -0.47
RAB4AP20338 COX11P1-201ENST00000489116 835 ntBASIC12.13□□□□□ -0.47
RAB4AP20338 TMA16-209ENST00000513272 803 ntTSL 2 BASIC12.13□□□□□ -0.47
RAB4AP20338 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC12.13□□□□□ -0.47
RAB4AP20338 RNF126P1-202ENST00000569893 925 ntBASIC12.13□□□□□ -0.47
RAB4AP20338 AC005336.2-201ENST00000593183 939 ntBASIC12.13□□□□□ -0.47
RAB4AP20338 AC073592.5-201ENST00000624854 528 ntBASIC12.13□□□□□ -0.47
RAB4AP20338 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
RAB4AP20338 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
RAB4AP20338 RALGDS-201ENST00000372047 3598 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
RAB4AP20338 ADGRD1-201ENST00000261654 5168 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Retrieved 100 of 98,524 protein–RNA pairs in 63.2 ms