Protein–RNA interactions for Protein: P16619

CCL3L1, C-C motif chemokine 3-like 1, humanhuman

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL3L1P16619 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC12.99□□□□□ -0.33
CCL3L1P16619 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC12.99□□□□□ -0.33
CCL3L1P16619 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC12.99□□□□□ -0.33
CCL3L1P16619 ZNF890P-202ENST00000530367 1156 ntBASIC12.99□□□□□ -0.33
CCL3L1P16619 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC12.99□□□□□ -0.33
CCL3L1P16619 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC12.99□□□□□ -0.33
CCL3L1P16619 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC12.99□□□□□ -0.33
CCL3L1P16619 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC12.99□□□□□ -0.33
CCL3L1P16619 PRR29-204ENST00000577953 565 ntTSL 4 BASIC12.99□□□□□ -0.33
CCL3L1P16619 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC12.99□□□□□ -0.33
CCL3L1P16619 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC12.99□□□□□ -0.33
CCL3L1P16619 MYB-201ENST00000316528 3571 ntTSL 5 BASIC12.99□□□□□ -0.33
CCL3L1P16619 MYB-241ENST00000616088 3573 ntTSL 5 BASIC12.99□□□□□ -0.33
CCL3L1P16619 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC12.99□□□□□ -0.33
CCL3L1P16619 AC127383.1-201ENST00000444697 1800 ntBASIC12.99□□□□□ -0.33
CCL3L1P16619 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
CCL3L1P16619 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
CCL3L1P16619 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
CCL3L1P16619 LOX-206ENST00000639739 1626 ntTSL 5 BASIC12.99□□□□□ -0.33
CCL3L1P16619 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
CCL3L1P16619 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
CCL3L1P16619 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
CCL3L1P16619 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
CCL3L1P16619 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
CCL3L1P16619 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC12.98□□□□□ -0.33
CCL3L1P16619 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC12.98□□□□□ -0.33
CCL3L1P16619 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
CCL3L1P16619 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
CCL3L1P16619 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
CCL3L1P16619 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
CCL3L1P16619 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC12.98□□□□□ -0.33
CCL3L1P16619 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
CCL3L1P16619 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
CCL3L1P16619 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
CCL3L1P16619 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
CCL3L1P16619 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
CCL3L1P16619 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC12.98□□□□□ -0.33
CCL3L1P16619 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
CCL3L1P16619 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
CCL3L1P16619 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
CCL3L1P16619 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC12.98□□□□□ -0.33
CCL3L1P16619 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
CCL3L1P16619 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC12.98□□□□□ -0.33
CCL3L1P16619 RAC2-204ENST00000406508 893 ntTSL 5 BASIC12.98□□□□□ -0.33
CCL3L1P16619 AC114501.2-201ENST00000439631 535 ntBASIC12.98□□□□□ -0.33
CCL3L1P16619 USP40-206ENST00000443711 628 ntTSL 2 BASIC12.98□□□□□ -0.33
CCL3L1P16619 BCRP1-201ENST00000444246 691 ntBASIC12.98□□□□□ -0.33
CCL3L1P16619 TMPRSS11CP-201ENST00000453277 683 ntBASIC12.98□□□□□ -0.33
CCL3L1P16619 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC12.98□□□□□ -0.33
CCL3L1P16619 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
CCL3L1P16619 SLED1-202ENST00000512051 380 ntBASIC12.98□□□□□ -0.33
CCL3L1P16619 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC12.98□□□□□ -0.33
CCL3L1P16619 SPCS2P1-201ENST00000561636 679 ntBASIC12.98□□□□□ -0.33
CCL3L1P16619 AC104794.3-201ENST00000566840 1248 ntBASIC12.98□□□□□ -0.33
CCL3L1P16619 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC12.98□□□□□ -0.33
CCL3L1P16619 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC12.98□□□□□ -0.33
CCL3L1P16619 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC12.98□□□□□ -0.33
CCL3L1P16619 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
CCL3L1P16619 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
CCL3L1P16619 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC12.98□□□□□ -0.33
CCL3L1P16619 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
CCL3L1P16619 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC12.98□□□□□ -0.33
CCL3L1P16619 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
CCL3L1P16619 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
CCL3L1P16619 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
CCL3L1P16619 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
CCL3L1P16619 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC12.98□□□□□ -0.33
CCL3L1P16619 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
CCL3L1P16619 CNST-203ENST00000366513 5126 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
CCL3L1P16619 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC12.98□□□□□ -0.33
CCL3L1P16619 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC12.98□□□□□ -0.33
CCL3L1P16619 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
CCL3L1P16619 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC12.98□□□□□ -0.33
CCL3L1P16619 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC12.98□□□□□ -0.33
CCL3L1P16619 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
CCL3L1P16619 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC12.98□□□□□ -0.33
CCL3L1P16619 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC12.97□□□□□ -0.33
CCL3L1P16619 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
CCL3L1P16619 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
CCL3L1P16619 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
CCL3L1P16619 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
CCL3L1P16619 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
CCL3L1P16619 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
CCL3L1P16619 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC12.97□□□□□ -0.33
CCL3L1P16619 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
CCL3L1P16619 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
CCL3L1P16619 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
CCL3L1P16619 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
CCL3L1P16619 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
CCL3L1P16619 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
CCL3L1P16619 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC12.97□□□□□ -0.33
CCL3L1P16619 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
CCL3L1P16619 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
CCL3L1P16619 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
CCL3L1P16619 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
CCL3L1P16619 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
CCL3L1P16619 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
CCL3L1P16619 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC12.97□□□□□ -0.33
CCL3L1P16619 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC12.97□□□□□ -0.33
CCL3L1P16619 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 42.8 ms