Protein–RNA interactions for Protein: P16333

NCK1, Cytoplasmic protein NCK1, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCK1P16333 TFE3-201ENST00000315869 3415 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
NCK1P16333 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
NCK1P16333 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC14.92□□□□□ -0.02
NCK1P16333 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC14.92□□□□□ -0.02
NCK1P16333 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
NCK1P16333 CRYGEP-201ENST00000412192 528 ntBASIC14.92□□□□□ -0.02
NCK1P16333 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC14.92□□□□□ -0.02
NCK1P16333 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
NCK1P16333 KRT18P67-201ENST00000432816 1264 ntBASIC14.92□□□□□ -0.02
NCK1P16333 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC14.92□□□□□ -0.02
NCK1P16333 SDHD-206ENST00000528182 754 ntTSL 3 BASIC14.92□□□□□ -0.02
NCK1P16333 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
NCK1P16333 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
NCK1P16333 TPM1-226ENST00000560959 925 ntTSL 2 BASIC14.92□□□□□ -0.02
NCK1P16333 ZEB2-225ENST00000558170 4012 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
NCK1P16333 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
NCK1P16333 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
NCK1P16333 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
NCK1P16333 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC14.92□□□□□ -0.02
NCK1P16333 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC14.92□□□□□ -0.02
NCK1P16333 LINC01010-201ENST00000431422 2069 ntTSL 2 BASIC14.92□□□□□ -0.02
NCK1P16333 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC14.92□□□□□ -0.02
NCK1P16333 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
NCK1P16333 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
NCK1P16333 GAS2L2-203ENST00000618498 2655 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
NCK1P16333 NFS1-203ENST00000374092 3012 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
NCK1P16333 AC123912.2-201ENST00000594927 2409 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
NCK1P16333 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
NCK1P16333 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC14.92□□□□□ -0.02
NCK1P16333 TNFRSF11A-202ENST00000586569 8147 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
NCK1P16333 CCNY-201ENST00000265375 4768 ntAPPRIS ALT1 TSL 1 (best) BASIC14.92□□□□□ -0.02
NCK1P16333 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
NCK1P16333 C5orf66-206ENST00000624272 2479 ntTSL 2 BASIC14.91□□□□□ -0.02
NCK1P16333 NFATC4-204ENST00000424781 5488 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
NCK1P16333 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC14.91□□□□□ -0.02
NCK1P16333 CUX1-214ENST00000550008 4350 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
NCK1P16333 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
NCK1P16333 C21orf58-204ENST00000397682 2941 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
NCK1P16333 CNOT10-201ENST00000328834 2815 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
NCK1P16333 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
NCK1P16333 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC14.91□□□□□ -0.02
NCK1P16333 CAMKK2-211ENST00000538733 5175 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
NCK1P16333 TMPRSS6-202ENST00000381792 3260 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
NCK1P16333 C17orf107-201ENST00000381365 3199 ntAPPRIS P2 TSL 2 BASIC14.91□□□□□ -0.02
NCK1P16333 PLEKHA4-201ENST00000263265 3088 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
NCK1P16333 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
NCK1P16333 RPS2P28-201ENST00000314255 741 ntBASIC14.91□□□□□ -0.02
NCK1P16333 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
NCK1P16333 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
NCK1P16333 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC14.91□□□□□ -0.02
NCK1P16333 OPA1-204ENST00000361828 6381 ntAPPRIS ALT1 TSL 5 BASIC14.91□□□□□ -0.02
NCK1P16333 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC14.91□□□□□ -0.02
NCK1P16333 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
NCK1P16333 NME2-201ENST00000393183 568 ntTSL 2 BASIC14.91□□□□□ -0.02
NCK1P16333 METTL26-205ENST00000397666 726 ntTSL 2 BASIC14.91□□□□□ -0.02
NCK1P16333 RAC2-202ENST00000401529 569 ntTSL 4 BASIC14.91□□□□□ -0.02
NCK1P16333 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC14.91□□□□□ -0.02
NCK1P16333 HCG4B-203ENST00000450128 991 ntBASIC14.91□□□□□ -0.02
NCK1P16333 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
NCK1P16333 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
NCK1P16333 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC14.91□□□□□ -0.02
NCK1P16333 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC14.91□□□□□ -0.02
NCK1P16333 PAM16-215ENST00000577031 548 ntTSL 4 BASIC14.91□□□□□ -0.02
NCK1P16333 TCAP-202ENST00000578283 583 ntTSL 5 BASIC14.91□□□□□ -0.02
NCK1P16333 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC14.91□□□□□ -0.02
NCK1P16333 AL049840.3-201ENST00000602669 611 ntBASIC14.91□□□□□ -0.02
NCK1P16333 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
NCK1P16333 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC14.91□□□□□ -0.02
NCK1P16333 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC14.91□□□□□ -0.02
NCK1P16333 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
NCK1P16333 KRT20-201ENST00000167588 1737 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
NCK1P16333 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
NCK1P16333 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
NCK1P16333 PPL-205ENST00000590782 5845 ntAPPRIS ALT1 TSL 5 BASIC14.91□□□□□ -0.02
NCK1P16333 PRKD2-206ENST00000595515 3012 ntTSL 2 BASIC14.91□□□□□ -0.02
NCK1P16333 RUNX1T1-251ENST00000615601 7372 ntAPPRIS ALT1 TSL 5 BASIC14.91□□□□□ -0.02
NCK1P16333 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC14.91□□□□□ -0.02
NCK1P16333 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC14.91□□□□□ -0.02
NCK1P16333 LPAR5-201ENST00000329858 3171 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
NCK1P16333 NAA60-229ENST00000575076 2531 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
NCK1P16333 HSDL1-201ENST00000219439 3519 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
NCK1P16333 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
NCK1P16333 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
NCK1P16333 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC14.91□□□□□ -0.02
NCK1P16333 GJD2-201ENST00000290374 2889 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
NCK1P16333 IMPDH1-201ENST00000338791 2881 ntTSL 2 BASIC14.91□□□□□ -0.02
NCK1P16333 IMPDH1-217ENST00000626419 2862 ntAPPRIS ALT1 TSL 5 BASIC14.91□□□□□ -0.02
NCK1P16333 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC14.9□□□□□ -0.02
NCK1P16333 AP4E1-201ENST00000261842 6758 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
NCK1P16333 PPL-201ENST00000345988 6238 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
NCK1P16333 ST3GAL3-208ENST00000361392 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
NCK1P16333 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
NCK1P16333 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC14.9□□□□□ -0.02
NCK1P16333 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC14.9□□□□□ -0.02
NCK1P16333 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
NCK1P16333 FAM186B-201ENST00000257894 2944 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
NCK1P16333 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
NCK1P16333 AC005840.4-201ENST00000541242 2494 ntBASIC14.9□□□□□ -0.02
NCK1P16333 ZBED1P1-201ENST00000502364 1930 ntBASIC14.9□□□□□ -0.02
NCK1P16333 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 37.4 ms