Protein–RNA interactions for Protein: P13994

CCDC130, Coiled-coil domain-containing protein 130, humanhuman

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC130P13994 AL353779.1-201ENST00000434793 351 ntBASIC16.64■□□□□ 0.25
CCDC130P13994 COX20P2-201ENST00000452636 358 ntBASIC16.64■□□□□ 0.25
CCDC130P13994 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC16.64■□□□□ 0.25
CCDC130P13994 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC16.64■□□□□ 0.25
CCDC130P13994 MIR8072-201ENST00000614241 80 ntBASIC16.64■□□□□ 0.25
CCDC130P13994 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CCDC130P13994 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
CCDC130P13994 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
CCDC130P13994 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CCDC130P13994 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CCDC130P13994 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CCDC130P13994 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC16.64■□□□□ 0.25
CCDC130P13994 AL121723.1-201ENST00000445194 1519 ntBASIC16.64■□□□□ 0.25
CCDC130P13994 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CCDC130P13994 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC16.64■□□□□ 0.25
CCDC130P13994 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CCDC130P13994 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
CCDC130P13994 PCNX3-201ENST00000355703 7105 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
CCDC130P13994 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC16.64■□□□□ 0.25
CCDC130P13994 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
CCDC130P13994 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CCDC130P13994 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
CCDC130P13994 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
CCDC130P13994 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CCDC130P13994 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CCDC130P13994 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CCDC130P13994 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC16.64■□□□□ 0.25
CCDC130P13994 AC127383.1-201ENST00000444697 1800 ntBASIC16.63■□□□□ 0.25
CCDC130P13994 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CCDC130P13994 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CCDC130P13994 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CCDC130P13994 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CCDC130P13994 TP73-209ENST00000603362 1668 ntTSL 5 BASIC16.63■□□□□ 0.25
CCDC130P13994 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC16.63■□□□□ 0.25
CCDC130P13994 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CCDC130P13994 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
CCDC130P13994 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CCDC130P13994 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC16.63■□□□□ 0.25
CCDC130P13994 AC138969.3-201ENST00000546612 1459 ntBASIC16.63■□□□□ 0.25
CCDC130P13994 AC138932.2-201ENST00000548268 1459 ntBASIC16.63■□□□□ 0.25
CCDC130P13994 AC126755.4-201ENST00000549796 1459 ntBASIC16.63■□□□□ 0.25
CCDC130P13994 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC16.63■□□□□ 0.25
CCDC130P13994 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CCDC130P13994 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC16.63■□□□□ 0.25
CCDC130P13994 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CCDC130P13994 MEP1AP4-201ENST00000423244 1087 ntBASIC16.63■□□□□ 0.25
CCDC130P13994 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC16.63■□□□□ 0.25
CCDC130P13994 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC16.63■□□□□ 0.25
CCDC130P13994 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC16.63■□□□□ 0.25
CCDC130P13994 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
CCDC130P13994 IL32-215ENST00000529550 772 ntAPPRIS P4 TSL 3 BASIC16.63■□□□□ 0.25
CCDC130P13994 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC16.63■□□□□ 0.25
CCDC130P13994 AC140912.1-201ENST00000577171 1054 ntBASIC16.63■□□□□ 0.25
CCDC130P13994 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC16.63■□□□□ 0.25
CCDC130P13994 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CCDC130P13994 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CCDC130P13994 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CCDC130P13994 ING5-213ENST00000636051 4199 ntTSL 5 BASIC16.63■□□□□ 0.25
CCDC130P13994 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CCDC130P13994 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CCDC130P13994 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CCDC130P13994 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
CCDC130P13994 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CCDC130P13994 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC16.63■□□□□ 0.25
CCDC130P13994 AL391825.1-201ENST00000457671 1364 ntBASIC16.63■□□□□ 0.25
CCDC130P13994 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC16.63■□□□□ 0.25
CCDC130P13994 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
CCDC130P13994 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CCDC130P13994 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CCDC130P13994 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CCDC130P13994 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CCDC130P13994 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC16.62■□□□□ 0.25
CCDC130P13994 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CCDC130P13994 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
CCDC130P13994 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
CCDC130P13994 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CCDC130P13994 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC16.62■□□□□ 0.25
CCDC130P13994 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CCDC130P13994 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CCDC130P13994 HLA-DQB2-231ENST00000435145 2026 ntBASIC16.62■□□□□ 0.25
CCDC130P13994 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CCDC130P13994 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC16.62■□□□□ 0.25
CCDC130P13994 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC16.62■□□□□ 0.25
CCDC130P13994 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CCDC130P13994 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC16.62■□□□□ 0.25
CCDC130P13994 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC16.62■□□□□ 0.25
CCDC130P13994 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC16.62■□□□□ 0.25
CCDC130P13994 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC16.62■□□□□ 0.25
CCDC130P13994 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CCDC130P13994 RHOA-206ENST00000454011 889 ntTSL 2 BASIC16.62■□□□□ 0.25
CCDC130P13994 TAF8-206ENST00000472818 719 ntTSL 2 BASIC16.62■□□□□ 0.25
CCDC130P13994 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC16.62■□□□□ 0.25
CCDC130P13994 FADS2-205ENST00000517839 469 ntTSL 3 BASIC16.62■□□□□ 0.25
CCDC130P13994 AP005018.1-201ENST00000525475 301 ntBASIC16.62■□□□□ 0.25
CCDC130P13994 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC16.62■□□□□ 0.25
CCDC130P13994 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC16.62■□□□□ 0.25
CCDC130P13994 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CCDC130P13994 AC123567.1-201ENST00000548294 1261 ntBASIC16.62■□□□□ 0.25
CCDC130P13994 AC036164.1-201ENST00000570544 333 ntBASIC16.62■□□□□ 0.25
CCDC130P13994 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC16.62■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 50.5 ms