Protein–RNA interactions for Protein: P13073

COX4I1, Cytochrome c oxidase subunit 4 isoform 1, mitochondrial, humanhuman

Predictions only

Length 169 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COX4I1P13073 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
COX4I1P13073 POLD4-207ENST00000531239 584 ntTSL 2 BASIC15.2■□□□□ 0.02
COX4I1P13073 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC15.2■□□□□ 0.02
COX4I1P13073 AC091304.2-201ENST00000564639 760 ntBASIC15.2■□□□□ 0.02
COX4I1P13073 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC15.2■□□□□ 0.02
COX4I1P13073 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC15.2■□□□□ 0.02
COX4I1P13073 AC093458.2-201ENST00000623150 629 ntBASIC15.2■□□□□ 0.02
COX4I1P13073 SOCS5-202ENST00000394861 4058 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
COX4I1P13073 PCDHA7-201ENST00000356878 2922 ntAPPRIS ALT2 BASIC15.2■□□□□ 0.02
COX4I1P13073 LHX6-207ENST00000541397 2942 ntTSL 2 BASIC15.2■□□□□ 0.02
COX4I1P13073 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
COX4I1P13073 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
COX4I1P13073 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC15.2■□□□□ 0.02
COX4I1P13073 CCNDBP1-201ENST00000300213 3660 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
COX4I1P13073 ANO10-213ENST00000451430 2019 ntTSL 2 BASIC15.2■□□□□ 0.02
COX4I1P13073 CAPN1-224ENST00000533129 2792 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
COX4I1P13073 NTNG1-208ENST00000370074 3048 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
COX4I1P13073 PML-208ENST00000436891 3010 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
COX4I1P13073 PPP1R13L-202ENST00000418234 3118 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
COX4I1P13073 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
COX4I1P13073 WASH3P-207ENST00000560956 1394 ntBASIC15.2■□□□□ 0.02
COX4I1P13073 FO538757.1-201ENST00000623083 1397 ntBASIC15.2■□□□□ 0.02
COX4I1P13073 AC068946.1-202ENST00000318673 2745 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
COX4I1P13073 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
COX4I1P13073 PLXDC1-201ENST00000315392 6252 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
COX4I1P13073 ENDOD1-201ENST00000278505 4687 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
COX4I1P13073 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
COX4I1P13073 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
COX4I1P13073 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
COX4I1P13073 AC006504.5-208ENST00000588784 2401 ntBASIC15.19■□□□□ 0.02
COX4I1P13073 CD8A-203ENST00000409511 3048 ntAPPRIS P4 TSL 2 BASIC15.19■□□□□ 0.02
COX4I1P13073 LINC01230-201ENST00000625222 3017 ntBASIC15.19■□□□□ 0.02
COX4I1P13073 DEF8-210ENST00000563594 4450 ntAPPRIS P4 TSL 1 (best) BASIC15.19■□□□□ 0.02
COX4I1P13073 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
COX4I1P13073 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
COX4I1P13073 GOLGA2P9-201ENST00000596977 1937 ntBASIC15.19■□□□□ 0.02
COX4I1P13073 IMPDH1-201ENST00000338791 2881 ntTSL 2 BASIC15.19■□□□□ 0.02
COX4I1P13073 IMPDH1-217ENST00000626419 2862 ntAPPRIS ALT1 TSL 5 BASIC15.19■□□□□ 0.02
COX4I1P13073 RALGAPA1-203ENST00000389698 7864 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
COX4I1P13073 TBCE-202ENST00000406207 2012 ntAPPRIS P3 TSL 5 BASIC15.19■□□□□ 0.02
COX4I1P13073 RPL15-201ENST00000307839 2730 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
COX4I1P13073 CEP131-208ENST00000575907 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
COX4I1P13073 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
COX4I1P13073 COQ7-209ENST00000569127 2575 ntTSL 2 BASIC15.19■□□□□ 0.02
COX4I1P13073 FAM47E-STBD1-204ENST00000515604 3029 ntAPPRIS P2 TSL 2 BASIC15.19■□□□□ 0.02
COX4I1P13073 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
COX4I1P13073 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
COX4I1P13073 PRSS29P-201ENST00000440800 595 ntBASIC15.19■□□□□ 0.02
COX4I1P13073 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
COX4I1P13073 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC15.19■□□□□ 0.02
COX4I1P13073 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC15.19■□□□□ 0.02
COX4I1P13073 KRT18P21-201ENST00000515767 1272 ntBASIC15.19■□□□□ 0.02
COX4I1P13073 CD7-202ENST00000578509 925 ntTSL 3 BASIC15.19■□□□□ 0.02
COX4I1P13073 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC15.19■□□□□ 0.02
COX4I1P13073 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC15.19■□□□□ 0.02
COX4I1P13073 ALDOA-203ENST00000395248 2447 ntTSL 5 BASIC15.19■□□□□ 0.02
COX4I1P13073 TUSC3-201ENST00000382020 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC15.19■□□□□ 0.02
COX4I1P13073 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
COX4I1P13073 GPAT3-201ENST00000264409 2625 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
COX4I1P13073 GPAT2-202ENST00000434632 3061 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
COX4I1P13073 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC15.19■□□□□ 0.02
COX4I1P13073 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
COX4I1P13073 BX640514.1-201ENST00000583223 1918 ntBASIC15.19■□□□□ 0.02
COX4I1P13073 PUS1-202ENST00000376649 4094 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
COX4I1P13073 EPB41L3-201ENST00000341928 4706 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
COX4I1P13073 POMT1-204ENST00000402686 3038 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
COX4I1P13073 PPL-205ENST00000590782 5845 ntAPPRIS ALT1 TSL 5 BASIC15.19■□□□□ 0.02
COX4I1P13073 IRAK4-212ENST00000551736 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
COX4I1P13073 INTS4P1-203ENST00000641008 3683 ntBASIC15.19■□□□□ 0.02
COX4I1P13073 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC15.19■□□□□ 0.02
COX4I1P13073 GNAO1-201ENST00000262493 3337 ntAPPRIS P5 TSL 1 (best) BASIC15.19■□□□□ 0.02
COX4I1P13073 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
COX4I1P13073 BBS2-201ENST00000245157 2963 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
COX4I1P13073 MSI1-201ENST00000257552 2975 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
COX4I1P13073 FGFR3-203ENST00000352904 3733 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
COX4I1P13073 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
COX4I1P13073 GCK-204ENST00000403799 2729 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
COX4I1P13073 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
COX4I1P13073 ZNF365-207ENST00000410046 3379 ntTSL 2 BASIC15.18■□□□□ 0.02
COX4I1P13073 PSD-209ENST00000611678 3382 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
COX4I1P13073 SLC34A2-203ENST00000504570 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
COX4I1P13073 ZNF354B-201ENST00000322434 2802 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
COX4I1P13073 NKIRAS2-201ENST00000307641 2948 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
COX4I1P13073 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC15.18■□□□□ 0.02
COX4I1P13073 AC104452.1-203ENST00000636166 2266 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
COX4I1P13073 TRIM46-202ENST00000368382 3127 ntTSL 2 BASIC15.18■□□□□ 0.02
COX4I1P13073 MYADM-205ENST00000391771 3111 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
COX4I1P13073 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
COX4I1P13073 SPATS2L-209ENST00000409988 2698 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
COX4I1P13073 GAS2L2-203ENST00000618498 2655 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
COX4I1P13073 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC15.18■□□□□ 0.02
COX4I1P13073 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC15.18■□□□□ 0.02
COX4I1P13073 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC15.18■□□□□ 0.02
COX4I1P13073 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
COX4I1P13073 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC15.18■□□□□ 0.02
COX4I1P13073 CENPM-204ENST00000402420 688 ntTSL 5 BASIC15.18■□□□□ 0.02
COX4I1P13073 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
COX4I1P13073 AC073648.2-201ENST00000510116 352 ntBASIC15.18■□□□□ 0.02
COX4I1P13073 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC15.18■□□□□ 0.02
COX4I1P13073 MIR3652-201ENST00000579335 131 ntBASIC15.18■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 50.5 ms