Protein–RNA interactions for Protein: P08670

VIM, Vimentin, humanhuman

Known RBP Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VIMP08670 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC15.89■□□□□ 0.13
VIMP08670 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC15.89■□□□□ 0.13
VIMP08670 DRAXINP1-201ENST00000437611 948 ntBASIC15.89■□□□□ 0.13
VIMP08670 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC15.89■□□□□ 0.13
VIMP08670 AC104076.2-201ENST00000448912 469 ntBASIC15.89■□□□□ 0.13
VIMP08670 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC15.89■□□□□ 0.13
VIMP08670 CIB2-208ENST00000560618 804 ntTSL 2 BASIC15.89■□□□□ 0.13
VIMP08670 TPSP2-201ENST00000561760 610 ntBASIC15.89■□□□□ 0.13
VIMP08670 AC139887.3-201ENST00000568585 713 ntBASIC15.89■□□□□ 0.13
VIMP08670 NKAPP1-205ENST00000585790 367 ntBASIC15.89■□□□□ 0.13
VIMP08670 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC15.89■□□□□ 0.13
VIMP08670 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
VIMP08670 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC15.89■□□□□ 0.13
VIMP08670 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC15.89■□□□□ 0.13
VIMP08670 VSIR-201ENST00000394957 4689 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
VIMP08670 GID4-201ENST00000268719 4237 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
VIMP08670 DAAM2-201ENST00000274867 6194 ntAPPRIS ALT1 TSL 1 (best) BASIC15.89■□□□□ 0.13
VIMP08670 SUGP2-215ENST00000601879 5546 ntAPPRIS P3 TSL 2 BASIC15.89■□□□□ 0.13
VIMP08670 MAP2K1-201ENST00000307102 3410 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
VIMP08670 BCKDHA-201ENST00000269980 2103 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
VIMP08670 BAK1-201ENST00000360661 2132 ntTSL 5 BASIC15.89■□□□□ 0.13
VIMP08670 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
VIMP08670 PDE8A-201ENST00000310298 3984 ntAPPRIS P4 TSL 1 (best) BASIC15.89■□□□□ 0.13
VIMP08670 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
VIMP08670 PRKAG2-215ENST00000492843 2699 ntTSL 5 BASIC15.89■□□□□ 0.13
VIMP08670 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC15.89■□□□□ 0.13
VIMP08670 AC012569.1-201ENST00000591191 1524 ntBASIC15.89■□□□□ 0.13
VIMP08670 SPRY4-202ENST00000434127 2379 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
VIMP08670 STUM-202ENST00000366789 4093 ntAPPRIS ALT1 TSL 5 BASIC15.89■□□□□ 0.13
VIMP08670 MBD6-201ENST00000355673 4282 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
VIMP08670 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
VIMP08670 PCDHA7-201ENST00000356878 2922 ntAPPRIS ALT2 BASIC15.88■□□□□ 0.13
VIMP08670 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
VIMP08670 NOX5-203ENST00000448182 2498 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
VIMP08670 TAOK2-204ENST00000543033 4072 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
VIMP08670 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
VIMP08670 DACH1-204ENST00000620444 4627 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
VIMP08670 HTR3A-202ENST00000355556 2331 ntTSL 2 BASIC15.88■□□□□ 0.13
VIMP08670 AL122018.1-201ENST00000446607 2310 ntBASIC15.88■□□□□ 0.13
VIMP08670 OSBPL5-203ENST00000389989 3619 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
VIMP08670 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
VIMP08670 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
VIMP08670 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC15.88■□□□□ 0.13
VIMP08670 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC15.88■□□□□ 0.13
VIMP08670 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
VIMP08670 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC15.88■□□□□ 0.13
VIMP08670 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC15.88■□□□□ 0.13
VIMP08670 LINC00265-3P-201ENST00000447588 903 ntBASIC15.88■□□□□ 0.13
VIMP08670 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC15.88■□□□□ 0.13
VIMP08670 RBM42-202ENST00000586618 771 ntTSL 3 BASIC15.88■□□□□ 0.13
VIMP08670 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC15.88■□□□□ 0.13
VIMP08670 AC021097.1-201ENST00000607902 574 ntBASIC15.88■□□□□ 0.13
VIMP08670 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC15.88■□□□□ 0.13
VIMP08670 PPP4R4-201ENST00000304338 3868 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
VIMP08670 MED12L-203ENST00000422248 2757 ntAPPRIS ALT2 TSL 2 BASIC15.88■□□□□ 0.13
VIMP08670 ACER2-201ENST00000340967 2238 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
VIMP08670 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC15.88■□□□□ 0.13
VIMP08670 GPR37-201ENST00000303921 3021 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
VIMP08670 SMARCA2-208ENST00000382194 5679 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
VIMP08670 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
VIMP08670 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC15.88■□□□□ 0.13
VIMP08670 CDH20-201ENST00000262717 3882 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
VIMP08670 CACNA2D1-201ENST00000356253 3858 ntTSL 5 BASIC15.88■□□□□ 0.13
VIMP08670 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
VIMP08670 ZNF663P-201ENST00000400371 2722 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
VIMP08670 TBC1D8B-203ENST00000357242 5717 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
VIMP08670 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
VIMP08670 PRRT2-202ENST00000358758 2567 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
VIMP08670 OSBPL8-203ENST00000393250 3157 ntAPPRIS ALT1 TSL 5 BASIC15.87■□□□□ 0.13
VIMP08670 TOX3-201ENST00000219746 3233 ntAPPRIS P4 TSL 2 BASIC15.87■□□□□ 0.13
VIMP08670 LINC00476-204ENST00000429781 2825 ntTSL 2 BASIC15.87■□□□□ 0.13
VIMP08670 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
VIMP08670 TNIP1-214ENST00000522226 2238 ntAPPRIS P3 TSL 2 BASIC15.87■□□□□ 0.13
VIMP08670 MAP3K4-204ENST00000392142 5490 ntAPPRIS P4 TSL 1 (best) BASIC15.87■□□□□ 0.13
VIMP08670 ALOX15-201ENST00000293761 2677 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
VIMP08670 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC15.87■□□□□ 0.13
VIMP08670 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
VIMP08670 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
VIMP08670 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
VIMP08670 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC15.87■□□□□ 0.13
VIMP08670 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC15.87■□□□□ 0.13
VIMP08670 IL17RD-208ENST00000640796 2345 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
VIMP08670 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC15.87■□□□□ 0.13
VIMP08670 SP6-201ENST00000342234 3800 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
VIMP08670 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
VIMP08670 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC15.87■□□□□ 0.13
VIMP08670 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC15.87■□□□□ 0.13
VIMP08670 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
VIMP08670 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC15.87■□□□□ 0.13
VIMP08670 PNN-202ENST00000553331 656 ntTSL 3 BASIC15.87■□□□□ 0.13
VIMP08670 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC15.87■□□□□ 0.13
VIMP08670 RN7SL850P-201ENST00000579959 291 ntBASIC15.87■□□□□ 0.13
VIMP08670 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
VIMP08670 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC15.87■□□□□ 0.13
VIMP08670 AP001269.4-201ENST00000609611 512 ntBASIC15.87■□□□□ 0.13
VIMP08670 AC004706.3-202ENST00000621574 984 ntBASIC15.87■□□□□ 0.13
VIMP08670 UBE3A-224ENST00000635914 9352 ntTSL 5 BASIC15.87■□□□□ 0.13
VIMP08670 CBFA2T3-201ENST00000268679 4477 ntAPPRIS P4 TSL 1 (best) BASIC15.87■□□□□ 0.13
VIMP08670 TNPO2-202ENST00000425528 5122 ntAPPRIS P4 TSL 5 BASIC15.87■□□□□ 0.13
VIMP08670 ARHGAP23P1-201ENST00000562773 1937 ntBASIC15.87■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms