Protein–RNA interactions for Protein: P06753

TPM3, Tropomyosin alpha-3 chain, humanhuman

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3P06753 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
TPM3P06753 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC17.71■□□□□ 0.43
TPM3P06753 PRR29-207ENST00000580752 458 ntTSL 3 BASIC17.71■□□□□ 0.43
TPM3P06753 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC17.71■□□□□ 0.43
TPM3P06753 FGD5-AS1-202ENST00000424349 3792 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
TPM3P06753 SRSF2-203ENST00000392485 2885 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
TPM3P06753 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
TPM3P06753 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC17.71■□□□□ 0.43
TPM3P06753 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC17.71■□□□□ 0.43
TPM3P06753 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
TPM3P06753 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC17.71■□□□□ 0.42
TPM3P06753 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC17.71■□□□□ 0.42
TPM3P06753 CRYBG1-204ENST00000633556 9909 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
TPM3P06753 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TPM3P06753 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
TPM3P06753 AL137784.3-201ENST00000623858 2288 ntBASIC17.7■□□□□ 0.42
TPM3P06753 FAM114A2-215ENST00000522858 3379 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TPM3P06753 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
TPM3P06753 NKIRAS2-201ENST00000307641 2948 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TPM3P06753 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC17.7■□□□□ 0.42
TPM3P06753 RHPN1-201ENST00000289013 3683 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TPM3P06753 TBC1D8B-203ENST00000357242 5717 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
TPM3P06753 AC005840.4-201ENST00000541242 2494 ntBASIC17.7■□□□□ 0.42
TPM3P06753 SRD5A3-201ENST00000264228 4190 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TPM3P06753 HNRNPUL1-205ENST00000593587 2725 ntTSL 2 BASIC17.7■□□□□ 0.42
TPM3P06753 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
TPM3P06753 RPS2P28-201ENST00000314255 741 ntBASIC17.7■□□□□ 0.42
TPM3P06753 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
TPM3P06753 METTL26-205ENST00000397666 726 ntTSL 2 BASIC17.7■□□□□ 0.42
TPM3P06753 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC17.7■□□□□ 0.42
TPM3P06753 SLC4A1APP2-201ENST00000424054 1259 ntBASIC17.7■□□□□ 0.42
TPM3P06753 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC17.7■□□□□ 0.42
TPM3P06753 MOK-208ENST00000519058 917 ntTSL 2 BASIC17.7■□□□□ 0.42
TPM3P06753 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC17.7■□□□□ 0.42
TPM3P06753 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC17.7■□□□□ 0.42
TPM3P06753 AL356805.1-201ENST00000556383 341 ntTSL 3 BASIC17.7■□□□□ 0.42
TPM3P06753 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC17.7■□□□□ 0.42
TPM3P06753 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC17.7■□□□□ 0.42
TPM3P06753 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC17.7■□□□□ 0.42
TPM3P06753 SPRY4-202ENST00000434127 2379 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TPM3P06753 ARHGEF26-203ENST00000465817 2353 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
TPM3P06753 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
TPM3P06753 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
TPM3P06753 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC17.7■□□□□ 0.42
TPM3P06753 AC104452.1-203ENST00000636166 2266 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
TPM3P06753 STXBP6-201ENST00000323944 4132 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TPM3P06753 IL17RD-201ENST00000296318 8720 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TPM3P06753 OS9-207ENST00000439210 1946 ntTSL 2 BASIC17.7■□□□□ 0.42
TPM3P06753 TCOF1-201ENST00000323668 4832 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
TPM3P06753 GOPC-201ENST00000052569 4590 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TPM3P06753 AC140479.7-201ENST00000636301 2332 ntBASIC17.7■□□□□ 0.42
TPM3P06753 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TPM3P06753 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
TPM3P06753 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC17.69■□□□□ 0.42
TPM3P06753 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
TPM3P06753 SETD1B-203ENST00000604567 5969 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
TPM3P06753 ADAR-202ENST00000368474 6625 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
TPM3P06753 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TPM3P06753 MTRF1L-201ENST00000367230 3431 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
TPM3P06753 PVR-202ENST00000344956 3166 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
TPM3P06753 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TPM3P06753 PBX3-203ENST00000373487 2902 ntTSL 5 BASIC17.69■□□□□ 0.42
TPM3P06753 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
TPM3P06753 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC17.69■□□□□ 0.42
TPM3P06753 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
TPM3P06753 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TPM3P06753 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TPM3P06753 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
TPM3P06753 AL589702.1-201ENST00000641229 1509 ntBASIC17.69■□□□□ 0.42
TPM3P06753 TOR2A-202ENST00000373281 2477 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
TPM3P06753 PRDM16-203ENST00000378391 5447 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
TPM3P06753 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC17.69■□□□□ 0.42
TPM3P06753 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
TPM3P06753 FAM8A3P-201ENST00000427218 844 ntBASIC17.69■□□□□ 0.42
TPM3P06753 RNF146-204ENST00000476956 884 ntTSL 2 BASIC17.69■□□□□ 0.42
TPM3P06753 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC17.69■□□□□ 0.42
TPM3P06753 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC17.69■□□□□ 0.42
TPM3P06753 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TPM3P06753 CLEC4GP1-201ENST00000596555 870 ntBASIC17.69■□□□□ 0.42
TPM3P06753 AL078644.1-201ENST00000609881 752 ntBASIC17.69■□□□□ 0.42
TPM3P06753 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC17.69■□□□□ 0.42
TPM3P06753 TGIF2-202ENST00000373874 3432 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
TPM3P06753 AC009053.1-204ENST00000429810 2355 ntTSL 2 BASIC17.69■□□□□ 0.42
TPM3P06753 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
TPM3P06753 USP38-202ENST00000510377 4135 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
TPM3P06753 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
TPM3P06753 ABR-205ENST00000544583 5595 ntTSL 2 BASIC17.69■□□□□ 0.42
TPM3P06753 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
TPM3P06753 BTBD11-204ENST00000420571 3478 ntTSL 5 BASIC17.68■□□□□ 0.42
TPM3P06753 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC17.68■□□□□ 0.42
TPM3P06753 EVL-201ENST00000392920 1978 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
TPM3P06753 AC134407.2-201ENST00000625089 1978 ntBASIC17.68■□□□□ 0.42
TPM3P06753 PITPNM1-216ENST00000534749 4189 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
TPM3P06753 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
TPM3P06753 ACAN-202ENST00000439576 8840 ntAPPRIS P2 TSL 5 BASIC17.68■□□□□ 0.42
TPM3P06753 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TPM3P06753 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
TPM3P06753 PDE7A-203ENST00000401827 3673 ntAPPRIS ALT1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TPM3P06753 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TPM3P06753 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC17.68■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms