Protein–RNA interactions for Protein: P04233

CD74, HLA class II histocompatibility antigen gamma chain, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD74P04233 IQCE-201ENST00000325979 2179 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
CD74P04233 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC13.25□□□□□ -0.29
CD74P04233 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
CD74P04233 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
CD74P04233 TBCE-201ENST00000366601 1966 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
CD74P04233 FAM110C-201ENST00000327669 3760 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
CD74P04233 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
CD74P04233 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC13.25□□□□□ -0.29
CD74P04233 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
CD74P04233 MINK1-201ENST00000347992 4863 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
CD74P04233 ANKMY1-204ENST00000391987 3221 ntTSL 5 BASIC13.25□□□□□ -0.29
CD74P04233 NACAD-202ENST00000490531 4780 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
CD74P04233 CD8A-203ENST00000409511 3048 ntAPPRIS P4 TSL 2 BASIC13.25□□□□□ -0.29
CD74P04233 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
CD74P04233 PCDHA7-201ENST00000356878 2922 ntAPPRIS ALT2 BASIC13.25□□□□□ -0.29
CD74P04233 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
CD74P04233 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC13.25□□□□□ -0.29
CD74P04233 TRIM67-201ENST00000366653 3936 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
CD74P04233 GPR137C-201ENST00000321662 3888 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
CD74P04233 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
CD74P04233 COPS8-203ENST00000409334 794 ntTSL 5 BASIC13.25□□□□□ -0.29
CD74P04233 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC13.25□□□□□ -0.29
CD74P04233 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
CD74P04233 RPS2P1-201ENST00000434010 821 ntBASIC13.25□□□□□ -0.29
CD74P04233 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
CD74P04233 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
CD74P04233 AC061975.2-201ENST00000581722 295 ntBASIC13.25□□□□□ -0.29
CD74P04233 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC13.25□□□□□ -0.29
CD74P04233 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC13.25□□□□□ -0.29
CD74P04233 AC005593.1-201ENST00000624894 515 ntBASIC13.25□□□□□ -0.29
CD74P04233 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC13.25□□□□□ -0.29
CD74P04233 CYP1A1-210ENST00000617691 2521 ntTSL 5 BASIC13.25□□□□□ -0.29
CD74P04233 SUGP2-202ENST00000337018 3640 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
CD74P04233 IL17RD-208ENST00000640796 2345 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
CD74P04233 AL359183.1-201ENST00000623796 2132 ntBASIC13.25□□□□□ -0.29
CD74P04233 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
CD74P04233 LRRC41-201ENST00000343304 2947 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
CD74P04233 XRRA1-202ENST00000340360 5681 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
CD74P04233 ZNF663P-201ENST00000400371 2722 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
CD74P04233 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC13.25□□□□□ -0.29
CD74P04233 ERLIN2-205ENST00000518586 2623 ntTSL 2 BASIC13.25□□□□□ -0.29
CD74P04233 DFNA5-201ENST00000342947 2590 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
CD74P04233 YME1L1-202ENST00000375972 2517 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
CD74P04233 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
CD74P04233 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC13.24□□□□□ -0.29
CD74P04233 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
CD74P04233 PPP1R12A-AS1-201ENST00000552885 3234 ntTSL 3 BASIC13.24□□□□□ -0.29
CD74P04233 PPM1F-203ENST00000407142 5587 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
CD74P04233 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC13.24□□□□□ -0.29
CD74P04233 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
CD74P04233 WDR1-203ENST00000382452 3142 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
CD74P04233 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
CD74P04233 RAB2A-201ENST00000262646 3848 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
CD74P04233 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC13.24□□□□□ -0.29
CD74P04233 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
CD74P04233 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
CD74P04233 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC13.24□□□□□ -0.29
CD74P04233 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
CD74P04233 RAI14-202ENST00000428746 5064 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
CD74P04233 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
CD74P04233 FARP1-214ENST00000595437 4926 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
CD74P04233 SATB2-205ENST00000443023 6194 ntTSL 5 BASIC13.24□□□□□ -0.29
CD74P04233 HDAC2-206ENST00000519108 2000 ntTSL 2 BASIC13.24□□□□□ -0.29
CD74P04233 AL591623.1-201ENST00000417786 1960 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
CD74P04233 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
CD74P04233 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
CD74P04233 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
CD74P04233 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
CD74P04233 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC13.24□□□□□ -0.29
CD74P04233 RPS29-206ENST00000557111 488 ntTSL 2 BASIC13.24□□□□□ -0.29
CD74P04233 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC13.24□□□□□ -0.29
CD74P04233 AC087388.1-201ENST00000571370 1112 ntBASIC13.24□□□□□ -0.29
CD74P04233 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
CD74P04233 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC13.24□□□□□ -0.29
CD74P04233 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC13.24□□□□□ -0.29
CD74P04233 AC011467.4-201ENST00000594891 528 ntBASIC13.24□□□□□ -0.29
CD74P04233 AL121772.3-201ENST00000610840 674 ntBASIC13.24□□□□□ -0.29
CD74P04233 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC13.24□□□□□ -0.29
CD74P04233 SEPT7-201ENST00000350320 4350 ntAPPRIS P5 TSL 5 BASIC13.24□□□□□ -0.29
CD74P04233 ZMYM3-204ENST00000373982 1867 ntTSL 5 BASIC13.24□□□□□ -0.29
CD74P04233 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
CD74P04233 PIK3CD-206ENST00000536656 5483 ntTSL 5 BASIC13.24□□□□□ -0.29
CD74P04233 PIK3CD-208ENST00000628140 5483 ntTSL 5 BASIC13.24□□□□□ -0.29
CD74P04233 TRIM46-210ENST00000545012 2979 ntTSL 2 BASIC13.24□□□□□ -0.29
CD74P04233 TATDN3-202ENST00000366974 2389 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
CD74P04233 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC13.24□□□□□ -0.29
CD74P04233 SV2A-201ENST00000369145 2903 ntTSL 2 BASIC13.24□□□□□ -0.29
CD74P04233 ASTN2-206ENST00000361477 4001 ntTSL 5 BASIC13.24□□□□□ -0.29
CD74P04233 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC13.24□□□□□ -0.29
CD74P04233 OSBPL7-211ENST00000613735 2836 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
CD74P04233 POLR2E-213ENST00000615234 2831 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
CD74P04233 GAP43-201ENST00000305124 1691 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
CD74P04233 CCAR2-201ENST00000308511 4853 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
CD74P04233 UMODL1-AS1-201ENST00000329015 2141 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
CD74P04233 OR2V1-205ENST00000642036 2609 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
CD74P04233 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC13.24□□□□□ -0.29
CD74P04233 AC010327.5-201ENST00000586923 3061 ntBASIC13.24□□□□□ -0.29
CD74P04233 CXorf36-201ENST00000377934 2513 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
CD74P04233 CHN2-201ENST00000222792 3530 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CD74P04233 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms