Protein–RNA interactions for Protein: P04004

VTN, Vitronectin, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTNP04004 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
VTNP04004 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
VTNP04004 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
VTNP04004 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
VTNP04004 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC17.13■□□□□ 0.33
VTNP04004 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
VTNP04004 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
VTNP04004 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
VTNP04004 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
VTNP04004 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC17.13■□□□□ 0.33
VTNP04004 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
VTNP04004 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
VTNP04004 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
VTNP04004 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
VTNP04004 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
VTNP04004 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC17.13■□□□□ 0.33
VTNP04004 FLT3LG-201ENST00000204637 1046 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
VTNP04004 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
VTNP04004 SCGN-201ENST00000334979 704 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
VTNP04004 PRKN-201ENST00000338468 1276 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
VTNP04004 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC17.13■□□□□ 0.33
VTNP04004 GBGT1-202ENST00000372038 847 ntTSL 3 BASIC17.13■□□□□ 0.33
VTNP04004 PHACTR1-202ENST00000379329 707 ntTSL 2 BASIC17.13■□□□□ 0.33
VTNP04004 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
VTNP04004 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
VTNP04004 AC092933.1-201ENST00000393644 945 ntBASIC17.13■□□□□ 0.33
VTNP04004 IFITM3-201ENST00000399808 808 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
VTNP04004 SGK2-207ENST00000426287 1182 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
VTNP04004 FTH1P14-201ENST00000482930 551 ntBASIC17.13■□□□□ 0.33
VTNP04004 GAPDHP40-201ENST00000505218 1006 ntBASIC17.13■□□□□ 0.33
VTNP04004 MFF-223ENST00000524634 647 ntTSL 2 BASIC17.13■□□□□ 0.33
VTNP04004 AL118558.1-202ENST00000557242 451 ntTSL 3 BASIC17.13■□□□□ 0.33
VTNP04004 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC17.13■□□□□ 0.33
VTNP04004 AIPL1-204ENST00000570466 1196 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
VTNP04004 AC027601.2-201ENST00000571085 805 ntTSL 5 BASIC17.13■□□□□ 0.33
VTNP04004 LINC02351-201ENST00000614728 289 ntTSL 2 BASIC17.13■□□□□ 0.33
VTNP04004 SERF2-217ENST00000630046 862 ntTSL 5 BASIC17.13■□□□□ 0.33
VTNP04004 AL033527.4-201ENST00000641026 673 ntBASIC17.13■□□□□ 0.33
VTNP04004 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
VTNP04004 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
VTNP04004 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
VTNP04004 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC17.13■□□□□ 0.33
VTNP04004 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
VTNP04004 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC17.13■□□□□ 0.33
VTNP04004 ABCC9-203ENST00000326684 1693 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
VTNP04004 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
VTNP04004 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
VTNP04004 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
VTNP04004 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
VTNP04004 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
VTNP04004 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC17.13■□□□□ 0.33
VTNP04004 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
VTNP04004 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
VTNP04004 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
VTNP04004 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
VTNP04004 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
VTNP04004 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC17.12■□□□□ 0.33
VTNP04004 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
VTNP04004 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
VTNP04004 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC17.12■□□□□ 0.33
VTNP04004 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
VTNP04004 MFF-204ENST00000353339 2186 ntTSL 5 BASIC17.12■□□□□ 0.33
VTNP04004 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
VTNP04004 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
VTNP04004 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
VTNP04004 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
VTNP04004 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC17.12■□□□□ 0.33
VTNP04004 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
VTNP04004 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
VTNP04004 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
VTNP04004 NAT8-201ENST00000272425 947 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
VTNP04004 PDE6D-201ENST00000287600 1175 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
VTNP04004 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
VTNP04004 PLAC9-201ENST00000372263 785 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
VTNP04004 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC17.12■□□□□ 0.33
VTNP04004 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
VTNP04004 TBCB-211ENST00000589996 724 ntTSL 3 BASIC17.12■□□□□ 0.33
VTNP04004 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC17.12■□□□□ 0.33
VTNP04004 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
VTNP04004 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
VTNP04004 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
VTNP04004 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
VTNP04004 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
VTNP04004 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC17.12■□□□□ 0.33
VTNP04004 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC17.12■□□□□ 0.33
VTNP04004 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC17.12■□□□□ 0.33
VTNP04004 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
VTNP04004 AC092127.1-201ENST00000567093 3455 ntBASIC17.12■□□□□ 0.33
VTNP04004 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
VTNP04004 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC17.11■□□□□ 0.33
VTNP04004 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
VTNP04004 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
VTNP04004 ILF3-AS1-201ENST00000591501 1983 ntBASIC17.11■□□□□ 0.33
VTNP04004 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
VTNP04004 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
VTNP04004 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC17.11■□□□□ 0.33
VTNP04004 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
VTNP04004 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
VTNP04004 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
VTNP04004 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 47.6 ms