Protein–RNA interactions for Protein: P01375

TNF, Tumor necrosis factor, humanhuman

Predictions only

Length 233 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFP01375 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
TNFP01375 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC15.3■□□□□ 0.04
TNFP01375 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TNFP01375 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TNFP01375 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC15.3■□□□□ 0.04
TNFP01375 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC15.3■□□□□ 0.04
TNFP01375 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
TNFP01375 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC15.29■□□□□ 0.04
TNFP01375 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC15.29■□□□□ 0.04
TNFP01375 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TNFP01375 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TNFP01375 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
TNFP01375 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TNFP01375 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
TNFP01375 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
TNFP01375 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
TNFP01375 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
TNFP01375 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TNFP01375 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
TNFP01375 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TNFP01375 CTSW-201ENST00000307886 1300 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TNFP01375 AC134312.5-201ENST00000568031 1313 ntBASIC15.29■□□□□ 0.04
TNFP01375 SPAG11A-201ENST00000326558 612 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
TNFP01375 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC15.29■□□□□ 0.04
TNFP01375 AL645941.1-201ENST00000415875 338 ntTSL 3 BASIC15.29■□□□□ 0.04
TNFP01375 RPS2P32-201ENST00000439199 892 ntBASIC15.29■□□□□ 0.04
TNFP01375 AC093433.1-201ENST00000458048 571 ntBASIC15.29■□□□□ 0.04
TNFP01375 RNF216P1-213ENST00000494947 946 ntTSL 2 BASIC15.29■□□□□ 0.04
TNFP01375 OVOL1-AS1-202ENST00000532454 494 ntTSL 2 BASIC15.29■□□□□ 0.04
TNFP01375 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC15.29■□□□□ 0.04
TNFP01375 LINC01595-201ENST00000555406 639 ntTSL 3 BASIC15.29■□□□□ 0.04
TNFP01375 TUBB6-213ENST00000591909 1017 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
TNFP01375 COX6B1-204ENST00000592141 660 ntAPPRIS P1 TSL 3 BASIC15.29■□□□□ 0.04
TNFP01375 UBL5-208ENST00000593087 320 ntTSL 3 BASIC15.29■□□□□ 0.04
TNFP01375 AC107373.2-201ENST00000607735 490 ntBASIC15.29■□□□□ 0.04
TNFP01375 Six3os1_5.1-201ENST00000611000 271 ntBASIC15.29■□□□□ 0.04
TNFP01375 MIR6775-201ENST00000617557 69 ntBASIC15.29■□□□□ 0.04
TNFP01375 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC15.29■□□□□ 0.04
TNFP01375 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
TNFP01375 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
TNFP01375 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
TNFP01375 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC15.29■□□□□ 0.04
TNFP01375 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC15.29■□□□□ 0.04
TNFP01375 BLK-205ENST00000529894 2017 ntTSL 5 BASIC15.29■□□□□ 0.04
TNFP01375 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC15.29■□□□□ 0.04
TNFP01375 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TNFP01375 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
TNFP01375 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
TNFP01375 TBP-206ENST00000540980 1701 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
TNFP01375 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC15.29■□□□□ 0.04
TNFP01375 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TNFP01375 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
TNFP01375 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
TNFP01375 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
TNFP01375 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC15.28■□□□□ 0.04
TNFP01375 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC15.28■□□□□ 0.04
TNFP01375 ARL5B-201ENST00000377275 7196 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TNFP01375 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TNFP01375 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TNFP01375 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TNFP01375 FAM169B-201ENST00000332908 579 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
TNFP01375 TEX30-203ENST00000376022 828 ntTSL 2 BASIC15.28■□□□□ 0.04
TNFP01375 PRAF2-201ENST00000376386 801 ntTSL 2 BASIC15.28■□□□□ 0.04
TNFP01375 AGTRAP-202ENST00000376627 1055 ntTSL 5 BASIC15.28■□□□□ 0.04
TNFP01375 AC005229.1-201ENST00000392885 409 ntBASIC15.28■□□□□ 0.04
TNFP01375 ATP5D-202ENST00000395633 704 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TNFP01375 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC15.28■□□□□ 0.04
TNFP01375 KRT223P-202ENST00000449164 1292 ntBASIC15.28■□□□□ 0.04
TNFP01375 HYAL1-208ENST00000457214 1084 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
TNFP01375 AP001889.1-201ENST00000525414 633 ntBASIC15.28■□□□□ 0.04
TNFP01375 AP001582.1-201ENST00000525856 295 ntBASIC15.28■□□□□ 0.04
TNFP01375 FLJ27354-203ENST00000526694 851 ntTSL 2 BASIC15.28■□□□□ 0.04
TNFP01375 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC15.28■□□□□ 0.04
TNFP01375 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
TNFP01375 IFT20-206ENST00000578122 834 ntTSL 2 BASIC15.28■□□□□ 0.04
TNFP01375 IFT20-208ENST00000578985 831 ntTSL 3 BASIC15.28■□□□□ 0.04
TNFP01375 TBCB-211ENST00000589996 724 ntTSL 3 BASIC15.28■□□□□ 0.04
TNFP01375 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC15.28■□□□□ 0.04
TNFP01375 HIST1H3I-201ENST00000616365 411 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
TNFP01375 AC005252.2-201ENST00000624630 1141 ntBASIC15.28■□□□□ 0.04
TNFP01375 COX11-210ENST00000639671 696 ntBASIC15.28■□□□□ 0.04
TNFP01375 XRRA1-202ENST00000340360 5681 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
TNFP01375 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TNFP01375 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TNFP01375 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TNFP01375 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TNFP01375 DISC1-209ENST00000439617 7059 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
TNFP01375 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
TNFP01375 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
TNFP01375 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
TNFP01375 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
TNFP01375 ANKRD26-201ENST00000376087 6591 ntAPPRIS P2 TSL 5 BASIC15.28■□□□□ 0.04
TNFP01375 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TNFP01375 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
TNFP01375 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TNFP01375 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
TNFP01375 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
TNFP01375 POLL-217ENST00000628479 1953 ntTSL 5 BASIC15.27■□□□□ 0.04
TNFP01375 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
TNFP01375 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 60.3 ms