Protein–RNA interactions for Protein: O95985

TOP3B, DNA topoisomerase 3-beta-1, humanhuman

Known RBP Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3BO95985 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TOP3BO95985 AP006294.1-201ENST00000415407 339 ntBASIC16.17■□□□□ 0.18
TOP3BO95985 SATB1-217ENST00000493952 626 ntTSL 3 BASIC16.17■□□□□ 0.18
TOP3BO95985 WASH4P-201ENST00000564273 1246 ntBASIC16.17■□□□□ 0.18
TOP3BO95985 AL138918.1-201ENST00000568306 659 ntBASIC16.17■□□□□ 0.18
TOP3BO95985 MIR4538-201ENST00000581377 78 ntBASIC16.17■□□□□ 0.18
TOP3BO95985 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC16.17■□□□□ 0.18
TOP3BO95985 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TOP3BO95985 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC16.17■□□□□ 0.18
TOP3BO95985 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
TOP3BO95985 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC16.17■□□□□ 0.18
TOP3BO95985 WASH6P-202ENST00000359512 1437 ntBASIC16.17■□□□□ 0.18
TOP3BO95985 MAP1S-201ENST00000324096 3419 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
TOP3BO95985 GRID2IP-202ENST00000452113 3428 ntTSL 5 BASIC16.17■□□□□ 0.18
TOP3BO95985 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
TOP3BO95985 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TOP3BO95985 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC16.17■□□□□ 0.18
TOP3BO95985 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
TOP3BO95985 CALM1-216ENST00000626705 1341 ntTSL 5 BASIC16.17■□□□□ 0.18
TOP3BO95985 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC16.17■□□□□ 0.18
TOP3BO95985 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TOP3BO95985 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TOP3BO95985 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TOP3BO95985 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC16.16■□□□□ 0.18
TOP3BO95985 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC16.16■□□□□ 0.18
TOP3BO95985 PODN-201ENST00000312553 3010 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
TOP3BO95985 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC16.16■□□□□ 0.18
TOP3BO95985 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC16.16■□□□□ 0.18
TOP3BO95985 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TOP3BO95985 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
TOP3BO95985 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
TOP3BO95985 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
TOP3BO95985 ZNF334-202ENST00000457685 3487 ntTSL 2 BASIC16.16■□□□□ 0.18
TOP3BO95985 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
TOP3BO95985 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TOP3BO95985 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC16.16■□□□□ 0.18
TOP3BO95985 DKFZP434H168-201ENST00000567381 1905 ntBASIC16.16■□□□□ 0.18
TOP3BO95985 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
TOP3BO95985 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC16.16■□□□□ 0.18
TOP3BO95985 MARK3-202ENST00000303622 3283 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
TOP3BO95985 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TOP3BO95985 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
TOP3BO95985 PRAF2-201ENST00000376386 801 ntTSL 2 BASIC16.16■□□□□ 0.18
TOP3BO95985 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
TOP3BO95985 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
TOP3BO95985 FKBP11-203ENST00000453172 959 ntAPPRIS ALT2 TSL 2 BASIC16.16■□□□□ 0.18
TOP3BO95985 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
TOP3BO95985 LY6E-204ENST00000519546 971 ntTSL 2 BASIC16.16■□□□□ 0.18
TOP3BO95985 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
TOP3BO95985 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC16.16■□□□□ 0.18
TOP3BO95985 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC16.16■□□□□ 0.18
TOP3BO95985 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC16.16■□□□□ 0.18
TOP3BO95985 GPR182-203ENST00000622922 591 ntBASIC16.16■□□□□ 0.18
TOP3BO95985 AC004840.1-201ENST00000636359 365 ntBASIC16.16■□□□□ 0.18
TOP3BO95985 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC16.16■□□□□ 0.18
TOP3BO95985 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
TOP3BO95985 AL136379.1-201ENST00000623471 2642 ntBASIC16.16■□□□□ 0.18
TOP3BO95985 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
TOP3BO95985 BMP7-201ENST00000395863 4013 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TOP3BO95985 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
TOP3BO95985 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
TOP3BO95985 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
TOP3BO95985 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
TOP3BO95985 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC16.16■□□□□ 0.18
TOP3BO95985 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
TOP3BO95985 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC16.16■□□□□ 0.18
TOP3BO95985 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC16.16■□□□□ 0.18
TOP3BO95985 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
TOP3BO95985 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC16.15■□□□□ 0.18
TOP3BO95985 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TOP3BO95985 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC16.15■□□□□ 0.18
TOP3BO95985 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
TOP3BO95985 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
TOP3BO95985 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC16.15■□□□□ 0.18
TOP3BO95985 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TOP3BO95985 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TOP3BO95985 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TOP3BO95985 ZNF138-201ENST00000307355 1141 ntAPPRIS ALT2 TSL 4 BASIC16.15■□□□□ 0.18
TOP3BO95985 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
TOP3BO95985 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TOP3BO95985 WDR38-201ENST00000373574 1252 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
TOP3BO95985 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
TOP3BO95985 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TOP3BO95985 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TOP3BO95985 VMO1-203ENST00000416307 712 ntTSL 2 BASIC16.15■□□□□ 0.18
TOP3BO95985 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC16.15■□□□□ 0.18
TOP3BO95985 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC16.15■□□□□ 0.18
TOP3BO95985 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC16.15■□□□□ 0.18
TOP3BO95985 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
TOP3BO95985 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC16.15■□□□□ 0.18
TOP3BO95985 FAM8A2P-201ENST00000528813 1142 ntBASIC16.15■□□□□ 0.18
TOP3BO95985 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
TOP3BO95985 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC16.15■□□□□ 0.18
TOP3BO95985 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC16.15■□□□□ 0.18
TOP3BO95985 AC135178.3-201ENST00000583963 531 ntTSL 4 BASIC16.15■□□□□ 0.18
TOP3BO95985 AC018529.1-201ENST00000613063 361 ntBASIC16.15■□□□□ 0.18
TOP3BO95985 ING5-213ENST00000636051 4199 ntTSL 5 BASIC16.15■□□□□ 0.18
TOP3BO95985 ZNF212-201ENST00000335870 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TOP3BO95985 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
TOP3BO95985 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 39.6 ms