Protein–RNA interactions for Protein: O94822

LTN1, E3 ubiquitin-protein ligase listerin, humanhuman

Predictions only

Length 1,766 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1O94822 C17orf50-202ENST00000604830 477 ntTSL 3 BASIC20.34■□□□□ 0.85
LTN1O94822 AF254983.2-201ENST00000612331 135 ntBASIC20.34■□□□□ 0.85
LTN1O94822 PCBP2-OT1-201ENST00000634357 590 ntBASIC20.34■□□□□ 0.85
LTN1O94822 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
LTN1O94822 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
LTN1O94822 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC20.34■□□□□ 0.85
LTN1O94822 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
LTN1O94822 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC20.34■□□□□ 0.85
LTN1O94822 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
LTN1O94822 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC20.34■□□□□ 0.85
LTN1O94822 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC20.34■□□□□ 0.85
LTN1O94822 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
LTN1O94822 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC20.34■□□□□ 0.85
LTN1O94822 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
LTN1O94822 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
LTN1O94822 ANGPTL8-201ENST00000252453 872 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
LTN1O94822 NUDT1-201ENST00000339737 698 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
LTN1O94822 NUDT1-202ENST00000343985 771 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
LTN1O94822 NUDT1-203ENST00000356714 662 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
LTN1O94822 NUDT1-204ENST00000397046 712 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
LTN1O94822 OSM-202ENST00000403389 1000 ntAPPRIS ALT2 TSL 3 BASIC20.34■□□□□ 0.85
LTN1O94822 C9orf116-205ENST00000429260 678 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
LTN1O94822 RNMTL1P1-201ENST00000454103 560 ntBASIC20.34■□□□□ 0.85
LTN1O94822 MESTP3-201ENST00000503460 968 ntBASIC20.34■□□□□ 0.85
LTN1O94822 TPO-215ENST00000539820 1157 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
LTN1O94822 ANGPTL8-204ENST00000616433 1223 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
LTN1O94822 AP000593.2-201ENST00000542775 1433 ntBASIC20.34■□□□□ 0.85
LTN1O94822 CYP1A1-203ENST00000395049 1594 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
LTN1O94822 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC20.33■□□□□ 0.85
LTN1O94822 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC20.33■□□□□ 0.85
LTN1O94822 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC20.33■□□□□ 0.85
LTN1O94822 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.85
LTN1O94822 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
LTN1O94822 AC099398.1-201ENST00000567919 2776 ntBASIC20.33■□□□□ 0.85
LTN1O94822 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
LTN1O94822 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.85
LTN1O94822 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC20.33■□□□□ 0.85
LTN1O94822 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC20.33■□□□□ 0.84
LTN1O94822 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC20.33■□□□□ 0.84
LTN1O94822 C1orf53-201ENST00000367393 588 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
LTN1O94822 IGLC7-201ENST00000390331 441 ntAPPRIS P1 BASIC20.33■□□□□ 0.84
LTN1O94822 AC012506.3-201ENST00000415245 892 ntTSL 3 BASIC20.33■□□□□ 0.84
LTN1O94822 PTPA-217ENST00000434095 870 ntTSL 2 BASIC20.33■□□□□ 0.84
LTN1O94822 DGUOK-AS1-202ENST00000439192 563 ntTSL 2 BASIC20.33■□□□□ 0.84
LTN1O94822 LILRA5-204ENST00000486742 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.84
LTN1O94822 AC106794.1-201ENST00000506935 792 ntBASIC20.33■□□□□ 0.84
LTN1O94822 MARK2P5-201ENST00000507649 634 ntBASIC20.33■□□□□ 0.84
LTN1O94822 CATSPERZ-203ENST00000539943 917 ntAPPRIS ALT2 TSL 2 BASIC20.33■□□□□ 0.84
LTN1O94822 AL160314.3-201ENST00000556041 767 ntBASIC20.33■□□□□ 0.84
LTN1O94822 AC079328.1-201ENST00000560358 952 ntBASIC20.33■□□□□ 0.84
LTN1O94822 DHRS7C-202ENST00000571134 984 ntAPPRIS ALT1 TSL 1 (best) BASIC20.33■□□□□ 0.84
LTN1O94822 AC132192.2-201ENST00000596206 1147 ntBASIC20.33■□□□□ 0.84
LTN1O94822 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
LTN1O94822 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC20.33■□□□□ 0.84
LTN1O94822 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC20.33■□□□□ 0.84
LTN1O94822 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
LTN1O94822 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
LTN1O94822 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
LTN1O94822 CELF2-206ENST00000608830 1892 ntAPPRIS ALT1 TSL 1 (best) BASIC20.32■□□□□ 0.84
LTN1O94822 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
LTN1O94822 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
LTN1O94822 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
LTN1O94822 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
LTN1O94822 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
LTN1O94822 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
LTN1O94822 WDR45-224ENST00000485908 1301 ntTSL 5 BASIC20.32■□□□□ 0.84
LTN1O94822 C9orf24-201ENST00000297623 1151 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
LTN1O94822 MRPS12-201ENST00000308018 1207 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
LTN1O94822 RAB36-202ENST00000341989 936 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
LTN1O94822 RBM38-204ENST00000371219 760 ntTSL 2 BASIC20.32■□□□□ 0.84
LTN1O94822 C9orf24-205ENST00000379133 712 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
LTN1O94822 SEPT7P2-209ENST00000450436 601 ntTSL 4 BASIC20.32■□□□□ 0.84
LTN1O94822 AC022616.1-201ENST00000518688 554 ntBASIC20.32■□□□□ 0.84
LTN1O94822 GATD1-205ENST00000524550 995 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
LTN1O94822 SLIRP-210ENST00000557431 725 ntTSL 2 BASIC20.32■□□□□ 0.84
LTN1O94822 AC009955.4-201ENST00000597192 544 ntBASIC20.32■□□□□ 0.84
LTN1O94822 IFITM3-204ENST00000602735 713 ntAPPRIS ALT1 TSL 5 BASIC20.32■□□□□ 0.84
LTN1O94822 CDK7-214ENST00000626796 358 ntTSL 5 BASIC20.32■□□□□ 0.84
LTN1O94822 CDK7-215ENST00000629350 1149 ntTSL 5 BASIC20.32■□□□□ 0.84
LTN1O94822 AC244452.3-201ENST00000636814 210 ntBASIC20.32■□□□□ 0.84
LTN1O94822 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
LTN1O94822 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC20.32■□□□□ 0.84
LTN1O94822 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
LTN1O94822 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
LTN1O94822 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
LTN1O94822 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC20.32■□□□□ 0.84
LTN1O94822 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC20.32■□□□□ 0.84
LTN1O94822 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
LTN1O94822 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
LTN1O94822 SUMO1-203ENST00000392246 1536 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
LTN1O94822 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
LTN1O94822 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC20.32■□□□□ 0.84
LTN1O94822 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC20.32■□□□□ 0.84
LTN1O94822 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC20.32■□□□□ 0.84
LTN1O94822 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
LTN1O94822 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC20.32■□□□□ 0.84
LTN1O94822 SLC12A8-207ENST00000469902 2989 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
LTN1O94822 CD27-201ENST00000266557 1338 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
LTN1O94822 SYCE2-201ENST00000293695 1231 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
LTN1O94822 AC079807.2-203ENST00000417692 656 ntTSL 2 BASIC20.31■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 73.3 ms